ggKbase home page

PLM4_5_b1_sep16_scaffold_8644

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_8644_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83..367)
DNA (285bp) protein (95aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003759907
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_8644_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(454..1014)
DNA (561bp) protein (187aa)
alcohol dehydrogenase Tax=Leeia oryzae RepID=UPI0003797340
frmA; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_8644_3
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

comp(1011..1445)
DNA (435bp) protein (145aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
frmA; alcohol dehydrogenase (EC:1.1.1.1)
alcohol dehydrogenase Tax=Leeia oryzae RepID=UPI0003797340
PLM4_5_b1_sep16_scaffold_8644_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1714..2565
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TRJ3_9PROT
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KGM31215.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
phytanoyl-coA dioxygenase
PLM4_5_b1_sep16_scaffold_8644_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2661..3644
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A114_STAND
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_8644_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3709..4611
DNA (903bp) protein (301aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate-tRNA ligase Tax=uncultured organism RepID=S5U8F9_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_8644_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4652..5947
DNA (1296bp) protein (432aa)
Rhomboid family protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNV7_OPITP
rhomboid family protein
Tax=BJP_08E140C01_Dechloromonas_61_78
PLM4_5_b1_sep16_scaffold_8644_8
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5911..6147
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KGR94747.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
PLM4_5_b1_sep16_scaffold_8644_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6753..7151
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RC55_CUPTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 9 items

View Taxonomy