ggKbase home page

PLM4_5_b1_sep16_scaffold_5198

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5198_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69..968
DNA (900bp) protein (300aa)
peptide ABC transporter permease Tax=Oceanicola sp. S124 RepID=UPI0002559754
dppC1; ABC transporter dipeptide permease DppC
ABC transporter dipeptide permease DppC {ECO:0000313|EMBL:AEI04831.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
PLM4_5_b1_sep16_scaffold_5198_2
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

968..2992
DNA (2025bp) protein (675aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein Tax=Alcanivorax pacificus W11-5 RepID=K2GMU2_9GAMM
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein {ECO:0000313|EMBL:AJD49683.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein
PLM4_5_b1_sep16_scaffold_5198_3
Edwardsiella tarda, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3070..3963
DNA (894bp) protein (298aa)
Transcriptional regulator Tax=Edwardsiella tarda RepID=D0ZGF0_EDWTE
Putative transcriptional regulator LYSR-type
Putative transcriptional regulator LYSR-type {ECO:0000313|EMBL:AIJ09758.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella tarda 080813.;"
PLM4_5_b1_sep16_scaffold_5198_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4048..4680
DNA (633bp) protein (211aa)
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Multiple antibiotic transporter bin=GWB2_Nitrospirae_rel_47_37 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
membrane protein
PLM4_5_b1_sep16_scaffold_5198_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4680..5654
DNA (975bp) protein (325aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNQ2_PUSST
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 5 items

View Taxonomy