ggKbase home page

PLM4_5_b1_sep16_scaffold_12655

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_12655_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..417
DNA (417bp) protein (139aa)
Transcriptional regulator, LysR family Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GCW3_NITSI
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

576..1262
DNA (687bp) protein (229aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B3605B
4-hydroxy-4-methyl-2-oxoglutarate aldolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2105..3169
DNA (1065bp) protein (355aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit Tax=Sulfobacillus acidophilus RepID=F8I9M9_SULAT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3169..3870
DNA (702bp) protein (234aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Thiol-driven fumarate reductase, iron-sulfur protein Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CS04_METMJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3863..4237
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4224..4532
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4560..5645
DNA (1086bp) protein (362aa)
NADPH dehydrogenase Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AU10_9RHOB
namA; FAD/FMN-binding oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5666..6247
DNA (582bp) protein (194aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=Bradyrhizobium sp. S23321 RepID=I0GCG0_9BRAD
fabG; 3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6279..7232
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7270..8241
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHP4_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34753.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
PLM4_5_b1_sep16_scaffold_12655_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8268..9500
DNA (1233bp) protein (411aa)
Permease of the major facilitator superfamily protein Tax=alpha proteobacterium BAL199 RepID=A8TP39_9PROT
major facilitator superfamily permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_12655_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9505..10500)
DNA (996bp) protein (332aa)
Extra-cytoplasmic solute receptor Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GRN0_CUPNN
DHA2 family major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12655_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10684..11481
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Bordetella bronchiseptica RepID=K0MN80_BORBM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 13 items

View Taxonomy