ggKbase home page

PLM4_5_b1_sep16_scaffold_3027_4

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(1704..2180)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA Tax=Thauera phenylacetica B4P RepID=N6YM10_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 158.0
  • Bit_score: 257
  • Evalue 5.30e-66
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 158.0
  • Bit_score: 257
  • Evalue 7.50e-66
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 158.0
  • Bit_score: 255
  • Evalue 9.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCTAAAACTCCCCTGACCGTGTTCGGCGCCGAAAAGCTGCGCGCCGAATTGCAGGAGTTGAAGACGGTCCAGCGGCCCGGCATCATCGCGGCGATCGCCGAGGCGCGCGCGCATGGCGACCTGTCCGAGAACGCCGAATATGCGGCGGCCAAGGAGCGCCAGAGTTTCATCGAAGGGCGCATCGCCGAAGTCGAGAGCAAACTGTCGAACGCGCAGATCATCGATCCCAAGCTGATCGACTCCGACGGCGGTTGCGTGTTCGGCGCCACGATCGAGCTCGAAGACATGAATAACGGCGACGTCGTCACCTACCAGATCGTCGGGGACGACGAGGCCGACATCAAGCAGGGCAAGATCTCGATCAGCTCGCCGATCGCACGCGCGCTCATCGGTAAGCACGCGGGCGATGTCGCCGAGGTCAAGGCGCCGGGCGGCGTGCGCGAGTACGAGATCCGGGACGTAAAATACATTTAG
PROTEIN sequence
Length: 159
MAKTPLTVFGAEKLRAELQELKTVQRPGIIAAIAEARAHGDLSENAEYAAAKERQSFIEGRIAEVESKLSNAQIIDPKLIDSDGGCVFGATIELEDMNNGDVVTYQIVGDDEADIKQGKISISSPIARALIGKHAGDVAEVKAPGGVREYEIRDVKYI*