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PLM4_5_b1_sep16_scaffold_3027

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3027_1
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..786)
DNA (627bp) protein (209aa)
Ribosomal RNA large subunit methyltransferase E bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
ribosomal RNA methyltransferase RrmJ/FtsJ
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM4_5_b1_sep16_scaffold_3027_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

803..1159
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKS5_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3027_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1184..1642)
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6B283_9PROT
hypothetical protein
Tax=CG_Rhodocyc_01
PLM4_5_b1_sep16_scaffold_3027_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1704..2180)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA Tax=Thauera phenylacetica B4P RepID=N6YM10_9RHOO
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transcription elongation factor GreA
PLM4_5_b1_sep16_scaffold_3027_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2196..5426)
DNA (3231bp) protein (1077aa)
Carbamoyl-phosphate synthase large chain Tax=Nitrosospira sp. APG3 RepID=M5DGC2_9PROT
carbamoyl-phosphate synthase large subunit
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_3027_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5410..6612)
DNA (1203bp) protein (401aa)
carbamoyl phosphate synthase small subunit Tax=Herbaspirillum sp. JC206 RepID=UPI00031BCDF6
carbamoyl-phosphate synthase small subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3027_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6757..7563)
DNA (807bp) protein (269aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase Tax=Sulfuricella denitrificans skB26 RepID=S6ABJ5_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3027_8
Eimeria acervulina, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(7574..8476)
DNA (903bp) protein (301aa)
Uncharacterized protein Tax=Eimeria acervulina RepID=U6G9D3_EIMAC
Uncharacterized protein {ECO:0000313|EMBL:CDI76132.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria acervulina (Coccidian parasite).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_3027_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8591..9022
DNA (432bp) protein (144aa)
Fur family transcriptional regulator Tax=Thiobacillus thioparus RepID=UPI0003675794
ferric uptake regulator family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_3027_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8949..10064)
DNA (1116bp) protein (372aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_3027_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..10279)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AEL4_NATA1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3027_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10310..10600)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Achromobacter piechaudii HLE RepID=J4YHD1_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3027_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10637..12298)
DNA (1662bp) protein (554aa)
DNA repair protein RecN Tax=Nitrosospira sp. APG3 RepID=M5DWS4_9PROT
DNA repair protein RecN
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_3027_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12411..13283)
DNA (873bp) protein (291aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Nitrosospira sp. APG3 RepID=M5DJT5_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_3027_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13372..14406
DNA (1035bp) protein (345aa)
Heat-inducible transcription repressor hrcA Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T232_JANMA
hrcA; heat-inducible transcription repressor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_3027_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14414..15508
DNA (1095bp) protein (365aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_3027_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15505..15858
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Oxalobacter formigenes OXCC13 RepID=C3XBX3_OXAFO
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_3027_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16005..16175
DNA (171bp) protein (57aa)
Protein GrpE Tax=Thauera sp. 27 RepID=N6XMQ9_9RHOO
molecular chaperone GrpE (heat shock protein)
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 18 items

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