ggKbase home page

PLM4_5_b1_sep16_scaffold_7621_9

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 6635..7051

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 Tax=Herbaspirillum sp. JC206 RepID=UPI00031ECD53 similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 122.0
  • Bit_score: 200
  • Evalue 8.80e-49
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 119.0
  • Bit_score: 201
  • Evalue 4.30e-49
LSU ribosomal protein L19p similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 130.0
  • Bit_score: 199
  • Evalue 4.30e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGACCTTATACAAAAGCTCGAAACTGAAGAAATTGCGCGGCTCGGAAAAAACATTCCGGACTTCAAGCCCGGCGACACCGTGGTGGTTAACGTCAACGTGGTCGAAGGCGACCGCAAGCGCGTCCAGGCGTACGAAGGCGTCGTGATTGCCAGGAAGAGCCGCGGGCTCAATTCGGCATTCATCGTGCGCAAAATCTCGTCGGGCGAAGGCGTCGAGCGGACGTTCCAGCTGTACTCGCCGCTGATCGCGTCGATCGAAGTTAAGCGCAAAGGCGACGTCAACCGCGCGAAGCTCTATTACCTGCGCCAGCTGTCGGGCAAGGCCGCGCGTATCAAAGAGCGCCTCGACGTGCGCGCCGACGATGTGTTGCCGCCGGTCGAAGCCGAGCAACCGCCGGCCGAAGCCAAGCCCTGA
PROTEIN sequence
Length: 139
MDLIQKLETEEIARLGKNIPDFKPGDTVVVNVNVVEGDRKRVQAYEGVVIARKSRGLNSAFIVRKISSGEGVERTFQLYSPLIASIEVKRKGDVNRAKLYYLRQLSGKAARIKERLDVRADDVLPPVEAEQPPAEAKP*