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PLM4_5_b1_sep16_scaffold_7621

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_7621_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1223)
DNA (1221bp) protein (407aa)
Type II secretion system protein Tax=Methylovorus RepID=C6X9L4_METSD
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_7621_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1328..2620)
DNA (1293bp) protein (431aa)
Magnesium and cobalt efflux protein CorC Tax=Nitrosospira sp. APG3 RepID=M5DHZ6_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM4_5_b1_sep16_scaffold_7621_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2685..3515)
DNA (831bp) protein (277aa)
CcsA-related protein Tax=Nitrosospira sp. APG3 RepID=M5DHP5_9PROT
cytochrome c assembly protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_7621_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3584..4834
DNA (1251bp) protein (417aa)
Signal recognition particle protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QME4_AZOSU
signal recognition particle protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_7621_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..4911
DNA (129bp) protein (43aa)
Signal recognition particle protein Tax=Nitrosospira sp. APG3 RepID=M5DFN0_9PROT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
signal recognition particle protein
PLM4_5_b1_sep16_scaffold_7621_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5088..5342
DNA (255bp) protein (85aa)
30S ribosomal protein S16 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=RS16_NITEU
rpsP; 30S ribosomal protein S16
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_7621_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5347..5859
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM Tax=Methylovorus RepID=C6XA89_METSD
16S rRNA processing protein RimM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_7621_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5859..6632
DNA (774bp) protein (258aa)
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AJ25_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_7621_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6635..7051
DNA (417bp) protein (139aa)
50S ribosomal protein L19 Tax=Herbaspirillum sp. JC206 RepID=UPI00031ECD53
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
LSU ribosomal protein L19p
PLM4_5_b1_sep16_scaffold_7621_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7394..8191
DNA (798bp) protein (266aa)
Tetratricopeptide TPR_4 Tax=mine drainage metagenome RepID=T1CY16_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 10 items

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