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PLM4_5_b1_sep16_scaffold_3255

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3255_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(2..1246)
DNA (1245bp) protein (415aa)
glycine cleavage system protein T bin=bin8_Chloro species=Nonomuraea coxensis genus=Nonomuraea taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
glycine cleavage system protein T
Tax=CSP1_4_Chloroflexi
PLM4_5_b1_sep16_scaffold_3255_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(1243..2118)
DNA (876bp) protein (292aa)
putative choline kinase involved in LPS biosynthesis bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
putative choline kinase involved in LPS biosynthesis
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM4_5_b1_sep16_scaffold_3255_3
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2146..2775
DNA (630bp) protein (210aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Mycobacterium rhodesiae JS60 RepID=G4HUS2_MYCRH
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EHB58355.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
phosphoglycolate phosphatase, bacterial
PLM4_5_b1_sep16_scaffold_3255_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2772..4100
DNA (1329bp) protein (443aa)
hypothetical protein Tax=Nocardiopsis lucentensis RepID=UPI0003473E31
glutamate--ammonia ligase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3255_5
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4093..4818
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N2Y3_9ACTO
Glutamine amidotransferase {ECO:0000313|EMBL:KJK58584.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
peptidase C26
PLM4_5_b1_sep16_scaffold_3255_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(4862..5608)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002E761DF
alpha/beta hydrolase fold protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_5_b1_sep16_scaffold_3255_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5641..6993
DNA (1353bp) protein (451aa)
Betaine-aldehyde dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR79_RUBXD
NAD-dependent aldehyde dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3255_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6993..7766
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR80_RUBXD
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:AHY48031.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM4_5_b1_sep16_scaffold_3255_9
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria

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7763..8245
DNA (483bp) protein (161aa)
lpp:plpp0069 hypothetical protein bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
PLM4_5_b1_sep16_scaffold_3255_10
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(8242..8694)
DNA (453bp) protein (151aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
hypothetical protein bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RBG_16_Actinobacteria_70_17_curated
PLM4_5_b1_sep16_scaffold_3255_trna_1
unknown

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8764..8836
DNA (73bp)
transferRNA Met
PLM4_5_b1_sep16_scaffold_3255_11
unknown

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comp(8870..9085)
DNA (216bp) protein (72aa)
phospholipase D/transphosphatidylase
PLM4_5_b1_sep16_scaffold_3255_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9111..9869)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B5DB69
ABC-type multidrug transport system permease component
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:AHY47395.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM4_5_b1_sep16_scaffold_3255_13
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9866..10639)
DNA (774bp) protein (258aa)
Putative multidrug ABC transporter permease protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S0_9ACTN
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM4_5_b1_sep16_scaffold_3255_14
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(10636..11601)
DNA (966bp) protein (322aa)
Multidrug ABC transporter ATP-binding protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4W0_9ACTN
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
DrrA: daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY47397.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM4_5_b1_sep16_scaffold_3255_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11660..12142
DNA (483bp) protein (161aa)
Transcriptional regulator MarR family Tax=Patulibacter medicamentivorans RepID=H0E5U3_9ACTN
MarR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3255_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12362..12739
DNA (378bp) protein (126aa)
pyridoxal biosynthesis lyase Tax=Sporichthya polymorpha RepID=UPI00036D3897
pyridoxal biosynthesis lyase PdxS
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 17 items

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