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PLM4_5_b1_sep16_scaffold_3382

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3382_1
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1239)
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B5E21D
Uncharacterized protein {ECO:0000313|EMBL:CCM64426.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
serine/threonine protein kinase
PLM4_5_b1_sep16_scaffold_3382_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1386..2102
DNA (717bp) protein (239aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EHN12477.1}; EC=3.2.2.- {ECO:0000313|EMBL:EHN12477.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
A/G-specific adenine glycosylase Tax=Patulibacter medicamentivorans RepID=H0E1J2_9ACTN
HhH-GPD family protein
PLM4_5_b1_sep16_scaffold_3382_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2091..2816)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Streptomyces sp. CNB091 RepID=UPI0003759953
Hypothetical Protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_5_b1_sep16_scaffold_3382_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2816..3295)
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=ISPF_MOOTA
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_5_b1_sep16_scaffold_3382_5
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3292..4083)
DNA (792bp) protein (264aa)
Histidinol phosphate phosphatase HisJ family Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHC4_THEM7
HisJ family histidinol phosphate phosphatase
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:ADU50688.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM4_5_b1_sep16_scaffold_3382_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4149..5411
DNA (1263bp) protein (421aa)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI000360D4F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97443.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM4_5_b1_sep16_scaffold_3382_7
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5397..6071)
DNA (675bp) protein (225aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Mycobacterium RepID=A1UMF7_MYCSK
PLM4_5_b1_sep16_scaffold_3382_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6078..6617)
DNA (540bp) protein (180aa)
Transcriptional regulator, CarD family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F138_CONWI
BadM/Rrf2 family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3382_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6749..7900)
DNA (1152bp) protein (384aa)
DNA integrity scanning protein DisA Tax=Patulibacter medicamentivorans RepID=H0E1E1_9ACTN
DNA integrity scanning protein DisA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3382_10
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7875..9152)
DNA (1278bp) protein (426aa)
DNA repair protein radA Tax=Burkholderia xenovorans (strain LB400) RepID=Q13X95_BURXL
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
PLM4_5_b1_sep16_scaffold_3382_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9190..10098)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B39954
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM4_5_b1_sep16_scaffold_3382_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10434..11645
DNA (1212bp) protein (404aa)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI000376AD20
peptidase M29 aminopeptidase II
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3382_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11658..14234)
DNA (2577bp) protein (859aa)
ATPase AAA-2 domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F133_CONWI
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ADB50109.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
ATPase AAA
PLM4_5_b1_sep16_scaffold_3382_14
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14372..15310)
DNA (939bp) protein (313aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=Mycobacterium rhodesiae JS60 RepID=G4HSP9_MYCRH
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EHB57960.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Displaying 14 items

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