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PLM4_5_b1_sep16_scaffold_2129

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2129_1
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3..542
-----------------
DNA (540bp)
protein (180aa)
Aldo/keto reductase Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZBC3_9PSEU
Aldo/keto reductase {ECO:0000313|EMBL:EME57669.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
aldo/keto reductase
PLM4_5_b1_sep16_scaffold_2129_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(532..1512)
-----------------
DNA (981bp)
protein (327aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Probable dual-specificity RNA methyltransferase RlmN Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J9_CONWI
radical SAM enzyme, Cfr family
PLM4_5_b1_sep16_scaffold_2129_3
unknown

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comp(1528..1749)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2129_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(1876..3483)
-----------------
DNA (1608bp)
protein (536aa)
id=14631018 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM4_5_b1_sep16_scaffold_2129_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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3509..4396
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein Tax=Paenibacillus terrigena RepID=UPI000367A916
methyltransferase
Tax=CSP1_3_Armatimonadetes
PLM4_5_b1_sep16_scaffold_2129_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4405..5865
-----------------
DNA (1461bp)
protein (487aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI0003615DBA
alpha amylase catalytic subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2129_7
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5908..7197
-----------------
DNA (1290bp)
protein (430aa)
Extracellular solute-binding protein family 1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VVH1_THESW
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:ETO38470.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
PLM4_5_b1_sep16_scaffold_2129_8
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7260..8162
-----------------
DNA (903bp)
protein (301aa)
ABC-type transporter, integral membrane subunit Tax=Thermoanaerobacter RepID=G2MX42_9THEO
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADD02038.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter italicus (strain DSM 9252 / Ab9).;"
PLM4_5_b1_sep16_scaffold_2129_9
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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8162..9076
-----------------
DNA (915bp)
protein (305aa)
ABC-type sugar transport system, permease component Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K8Y3_HALHC
ABC-type sugar transport system, permease component
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AGB41747.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
PLM4_5_b1_sep16_scaffold_2129_10
unknown

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9073..9195
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2129_11
unknown

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9192..9656
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2129_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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9644..10657
-----------------
DNA (1014bp)
protein (338aa)
ABC transporter; K10112 maltose/maltodextrin transport system ATP-binding protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
ABC transporter
Tax=CSP1_4_Chloroflexi
PLM4_5_b1_sep16_scaffold_2129_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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10707..11546
-----------------
DNA (840bp)
protein (280aa)
L-threonine aldolase (EC:4.1.2.5)
L-threonine aldolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXW4_RUBXD
Threonine aldolase {ECO:0000313|EMBL:ETW92988.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_5_b1_sep16_scaffold_2129_14
unknown

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11533..11709
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

Displaying 14 items

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