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PLM4_5_b1_sep16_scaffold_2556

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2556_1
unknown

Not on your lists

comp(2..217)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2556_2
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(214..1473)
DNA (1260bp) protein (420aa)
Regulatory protein Tax=Streptomyces hygroscopicus subsp. jinggangensis PF2_STRHJ">RepID=H2JPF2_STRHJ
regulatory protein
Regulatory protein {ECO:0000313|EMBL:AEY85875.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM4_5_b1_sep16_scaffold_2556_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1815..2885
DNA (1071bp) protein (357aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2556_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3167..4354
DNA (1188bp) protein (396aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A444_THECD
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2556_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4326..4856
DNA (531bp) protein (177aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha Tax=Streptomyces sulphureus RepID=UPI0003768C40
oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2556_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4853..5887
DNA (1035bp) protein (345aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JRQ9_STRHJ
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2556_7
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5884..7320)
DNA (1437bp) protein (479aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036BDA33
MFS transporter {ECO:0000313|EMBL:KIF71373.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
major facilitator superfamily protein
PLM4_5_b1_sep16_scaffold_2556_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7320..7979)
DNA (660bp) protein (220aa)
Channel protein, hemolysin III family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFE9_CONWI
hemolysin III family channel protein
Channel protein, hemolysin III family {ECO:0000313|EMBL:ADB53742.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM4_5_b1_sep16_scaffold_2556_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7992..8189)
DNA (198bp) protein (66aa)
Translation initiation factor IF-1 Tax=Patulibacter medicamentivorans RepID=H0E8N3_9ACTN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
translation initiation factor IF-1
PLM4_5_b1_sep16_scaffold_2556_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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8388..9578
DNA (1191bp) protein (397aa)
RNA helicase Tax=Patulibacter americanus RepID=UPI0003B74912
DEAD/DEAH box helicase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM4_5_b1_sep16_scaffold_2556_11
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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9627..10178
DNA (552bp) protein (184aa)
Type II secretion system protein E Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2U7_DICTD
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ACK42447.1}; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
PLM4_5_b1_sep16_scaffold_2556_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(10159..11388)
DNA (1230bp) protein (410aa)
hypothetical protein bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
major facilitator superfamily protein
Tax=CSP1_4_Chloroflexi
PLM4_5_b1_sep16_scaffold_2556_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11385..11816)
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family Tax=Rhizobium tropici CIAT 899 RepID=L0LIM2_RHITR
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGB69944.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
PLM4_5_b1_sep16_scaffold_2556_14
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(11841..13136)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein Tax=Trichomonas vaginalis RepID=A2F983_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAX98561.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2556_15
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13230..13673
DNA (444bp) protein (148aa)
Type IV pilin Tax=Aeromonas molluscorum 848 RepID=R1F5T0_9GAMM
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:BAO28530.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PLM4_5_b1_sep16_scaffold_2556_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(13677..14054)
DNA (378bp) protein (126aa)
Glutaredoxin Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F062_CONWI
glutaredoxin-like protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2556_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14051..14302)
DNA (252bp) protein (84aa)
BolA family protein Tax=Gloeobacter kilaueensis JS1 RepID=U5QHV0_9CYAN
BolA family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_2556_18
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14326..15324
DNA (999bp) protein (333aa)
ATPase AAA Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI000367447F
ATPase AAA
AAA ATPase central domain protein {ECO:0000313|EMBL:ACL38227.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
PLM4_5_b1_sep16_scaffold_2556_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15566..15763)
DNA (198bp) protein (66aa)
Putative oxidoreductase Tax=Rhodococcus opacus (strain B4) RepID=C1B5H8_RHOOB
oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 19 items

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