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PLM4_5_b1_sep16_scaffold_6276

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_6276_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2..1576)
DNA (1575bp) protein (525aa)
Membrane protein-like protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S410_GEOOG
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_6276_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1651..1899
DNA (249bp) protein (83aa)
Regulatory protein, FmdB family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEI1_CONWI
FmdB family regulatory protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_6276_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1896..3053)
DNA (1158bp) protein (386aa)
Cell envelope-related transcriptional attenuator Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH9_CONWI
cell envelope-related transcriptional attenuator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_6276_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3081..3995
DNA (915bp) protein (305aa)
ROK family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH8_CONWI
ROK family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_6276_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3998..4807
DNA (810bp) protein (270aa)
Ribosomal RNA small subunit methyltransferase I Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH7_CONWI
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_6276_6
unknown

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comp(4890..5735)
DNA (846bp) protein (282aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_6276_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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5842..7365
DNA (1524bp) protein (508aa)
Methionine--tRNA ligase Tax=Patulibacter medicamentivorans RepID=H0E1M9_9ACTN
methionyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM4_5_b1_sep16_scaffold_6276_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7362..8102
DNA (741bp) protein (247aa)
Hydrolase, TatD family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH2_CONWI
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ADB53664.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM4_5_b1_sep16_scaffold_6276_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


8099..8872
DNA (774bp) protein (258aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Ribosomal RNA small subunit methyltransferase A Tax=Patulibacter medicamentivorans RepID=H0E1M7_9ACTN
dimethyladenosine transferase
PLM4_5_b1_sep16_scaffold_6276_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8872..9687
DNA (816bp) protein (272aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=ISPE_RUBXD
Tax=RBG_16_Desulfobacca_60_12_curated
PLM4_5_b1_sep16_scaffold_6276_trna_1
unknown

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9920..9990
DNA (71bp)
transferRNA Gln
PLM4_5_b1_sep16_scaffold_6276_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10002..11327
DNA (1326bp) protein (442aa)
Bifunctional protein GlmU Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEG5_CONWI
UDP-N-acetylglucosamine pyrophosphorylase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM4_5_b1_sep16_scaffold_6276_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11302..12363
DNA (1062bp) protein (354aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXL6_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_6276_13
unknown

Not on your lists

12363..12431
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 14 items

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