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PLM4_5_b1_sep16_scaffold_7835

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_7835_1
unknown

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1..213
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_7835_2
unknown

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194..883
DNA (690bp) protein (230aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_7835_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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960..2129
DNA (1170bp) protein (390aa)
peptidase M23 Tax=Patulibacter americanus RepID=UPI0003B5D550
Membrane protein related to metalloendopeptidase {ECO:0000313|EMBL:EHN08891.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidase M23
PLM4_5_b1_sep16_scaffold_7835_4
unknown

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2199..2348
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_7835_5
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2349..2594)
DNA (246bp) protein (82aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ACA60138.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ACA60138.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Hypoxanthine phosphoribosyltransferase Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I586_DESAP
PLM4_5_b1_sep16_scaffold_7835_6

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comp(2772..3155)
DNA (384bp) protein (128aa)
Hypoxanthine phosphoribosyltransferase Tax=uncultured bacterium W5-102b RepID=H9BWL1_9BACT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AFD03183.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium W5-102b.;"
putative hypoxanthine phosphoribosyl transferase with additional GAF motif
PLM4_5_b1_sep16_scaffold_7835_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3184..3993
DNA (810bp) protein (270aa)
Metallophosphoesterase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF9_RUBXD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABG04619.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM4_5_b1_sep16_scaffold_7835_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3990..5153
DNA (1164bp) protein (388aa)
Cyclic 2,3-diphosphoglycerate synthetase {ECO:0000255|HAMAP-Rule:MF_01908}; Short=cDPGS {ECO:0000255|HAMAP-Rule:MF_01908};; EC=6.5.-.- {ECO:0000255|HAMAP-Rule:MF_01908};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Cyclic 2,3-diphosphoglycerate synthetase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=CPGS_RUBXD
cyclic 2,3-diphosphoglycerate-synthetase
PLM4_5_b1_sep16_scaffold_7835_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5150..6046
DNA (897bp) protein (299aa)
2-phosphoglycerate kinase Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IXH4_DEIGD
2-phosphoglycerate kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7835_10
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6043..7017
DNA (975bp) protein (325aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRW8_9FIRM
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
PLM4_5_b1_sep16_scaffold_7835_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7042..7341
DNA (300bp) protein (100aa)
Putative uncharacterized protein Tax=uncultured bacterium W5-102b RepID=H9BWK7_9BACT
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7835_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(7345..8442)
DNA (1098bp) protein (366aa)
Alcohol dehydrogenase zinc-binding domain protein bin=GWC2_Deltaproteobacteria_66_88 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7835_13
unknown

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comp(8509..8796)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_7835_14
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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9227..11005
DNA (1779bp) protein (593aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Putative Histidine kinase Tax=Nitrolancetus hollandicus Lb RepID=I4EKD8_9CHLR
GAF sensor signal transduction histidine kinase
PLM4_5_b1_sep16_scaffold_7835_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(11067..12938)
DNA (1872bp) protein (624aa)
Transcriptional regulator protein-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Q5_CONWI
transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7835_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(13016..13471)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_5_b1_sep16_scaffold_7835_17
unknown

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comp(13615..14259)
DNA (645bp) protein (215aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_7835_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(14256..14732)
DNA (477bp) protein (159aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_5_b1_sep16_scaffold_7835_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(14754..15032)
DNA (279bp) protein (93aa)
Aldehyde Dehydrogenase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6J9_9ACTN
aldehyde dehydrogenase
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying 19 items

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