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PLM4_5_b1_sep16_scaffold_4067

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4067_1
CG_Cyano_01, Cyanobacteria, Bacteria

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3..800
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=uncultured bacterium F39-01 RepID=I3VID6_9BACT
Tax=CG_Cyano_01
PLM4_5_b1_sep16_scaffold_4067_2
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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865..1554
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TK34_9CHLR bin=RBG2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
two component transcriptional regulator
Tax=RBG_16_Chloroflexi_57_8_curated
PLM4_5_b1_sep16_scaffold_4067_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1547..2932
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Integral membrane sensor signal transduction histidine kinase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TK35_9CHLR
integral membrane sensor signal transduction histidine kinase
PLM4_5_b1_sep16_scaffold_4067_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3013..4785
DNA (1773bp) protein (591aa)
Beta-lactamase {ECO:0000313|EMBL:KFE62106.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
beta-lactamase bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
beta-lactamase
PLM4_5_b1_sep16_scaffold_4067_5
unknown

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4785..5714
DNA (930bp) protein (310aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4067_6
unknown

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comp(5748..6362)
DNA (615bp) protein (205aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4067_7
unknown

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comp(6359..7126)
DNA (768bp) protein (256aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4067_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7128..7808)
DNA (681bp) protein (227aa)
OmpA/MotB domain protein Tax=Rhodothermus marinus RepID=D0MG70_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
OmpA/MotB domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_4067_9
unknown

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comp(7833..8180)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4067_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8177..8656)
DNA (480bp) protein (160aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_4067_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(9020..9697)
DNA (678bp) protein (226aa)
OmpA/MotB domain protein Tax=Rhodothermus marinus RepID=D0MG70_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
OmpA/MotB domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_4067_12
unknown

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comp(9805..10137)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4067_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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10269..10625
DNA (357bp) protein (119aa)
DNA-formamidopyrimidine glycosylase Tax=Anaeromyxobacter RepID=B4UGG1_ANASK bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Formamidopyrimidine-DNA glycosylase catalytic domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 13 items

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