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PLM4_5_b1_sep16_scaffold_1285

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_1285_1
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3..1259)
DNA (1257bp) protein (419aa)
Putative permease bin=GWA2_Elusimicrobia_66_18 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
permease
Tax=GWC2_Elusimicrobia_65_9_curated
PLM4_5_b1_sep16_scaffold_1285_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(1367..2212)
DNA (846bp) protein (282aa)
Membrane protease subunit Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH00_IGNAJ
Uncharacterized protein {ECO:0000313|EMBL:KDA54810.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
membrane protease subunit
PLM4_5_b1_sep16_scaffold_1285_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2314..3018
DNA (705bp) protein (235aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_5_b1_sep16_scaffold_1285_4
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3021..3761
DNA (741bp) protein (247aa)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B71924
Uncharacterized protein {ECO:0000313|EMBL:KFN41033.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_1285_5
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(3778..5205)
DNA (1428bp) protein (476aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K2CNQ9_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
PLM4_5_b1_sep16_scaffold_1285_6
unknown

Not on your lists

5293..6129
DNA (837bp) protein (279aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_1285_7
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6146..6691)
DNA (546bp) protein (182aa)
Dioxygenase Tax=Streptomyces turgidiscabies Car8 RepID=L7FIM7_9ACTO
Dioxygenase {ECO:0000313|EMBL:ELP70941.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
PLM4_5_b1_sep16_scaffold_1285_8
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6711..7538)
DNA (828bp) protein (276aa)
Peptidase M48, Ste24p Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AU50_PELPD
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABL00871.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_5_b1_sep16_scaffold_1285_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7665..10334)
DNA (2670bp) protein (890aa)
id=5225746 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_1285_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(10479..11783)
DNA (1305bp) protein (435aa)
citrate synthase i (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
citrate synthase i
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_1285_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12275..13012
DNA (738bp) protein (246aa)
Diguanylate cyclase (GGDEF) domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
diguanylate cyclase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_5_b1_sep16_scaffold_1285_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(12984..14675)
DNA (1692bp) protein (564aa)
Protease-like protein Tax=Janthinobacterium sp. HH01 RepID=L9PBV0_9BURK bin=16ft_combo_ws3_JS1 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protease-associated PA
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_1285_13
unknown

Not on your lists

comp(14680..15150)
DNA (471bp) protein (157aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_1285_14
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(15246..16799)
DNA (1554bp) protein (518aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F130_9DELT
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
PLM4_5_b1_sep16_scaffold_1285_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16951..17379
DNA (429bp) protein (143aa)
osmC; osmotically inducible protein C (EC:1.11.1.-)
Osmotically inducible protein C Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9D4_COLFT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_5_b1_sep16_scaffold_1285_16
unknown

Not on your lists

comp(17449..17571)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 16 items

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