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PLM4_5_b1_sep16_scaffold_2454

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2454_1
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..605
DNA (603bp) protein (201aa)
Putative methyltransferase Tax=Gordonia rhizosphera NBRC 16068 RepID=K6W8P0_9ACTO
Putative methyltransferase {ECO:0000313|EMBL:GAB90116.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
putative Methyltransferase type 11
PLM4_5_b1_sep16_scaffold_2454_2
unknown

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comp(610..1083)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2454_3
unknown

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comp(1159..1773)
DNA (615bp) protein (205aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2454_trna_1
unknown

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comp(1940..2011)
DNA (72bp)
transferRNA Asn
PLM4_5_b1_sep16_scaffold_2454_4
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

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comp(2157..2981)
DNA (825bp) protein (275aa)
Putative uncharacterized protein bin=GWB2_Elusimicrobium_63_22 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
NAD-dependent epimerase/dehydratase
Tax=GWB2_Elusimicrobia_63_22_curated
PLM4_5_b1_sep16_scaffold_2454_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2984..3784)
DNA (801bp) protein (267aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2454_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3826..4440)
DNA (615bp) protein (205aa)
two-component response receiver and regulator protein (EC:3.1.1.61) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PAS domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2454_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4437..4841)
DNA (405bp) protein (135aa)
divK; cell division response regulator DivK/Rre42 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
response regulator receiver protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2454_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4838..7984)
DNA (3147bp) protein (1049aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinokineospora enzanensis genus=Actinokineospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2454_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8091..9947)
DNA (1857bp) protein (619aa)
GTP-binding protein TypA/BipA Tax=Sulfurihydrogenibium RepID=C1DXB2_SULAA bin=16ft_combo_ws3_JS1 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
GTP-binding protein TypA
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2454_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(9985..10854)
DNA (870bp) protein (290aa)
Uncharacterized protein Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CH72_KOSOT bin=16ft_combo_ws3_JS1 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2454_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(11321..11596)
DNA (276bp) protein (92aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 12 items

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