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PLM4_5_b1_sep16_scaffold_2464

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2464_1
unknown

Not on your lists

comp(129..665)
DNA (537bp) protein (179aa)
id=24497936 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM4_5_b1_sep16_scaffold_2464_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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701..1891
DNA (1191bp) protein (397aa)
menaquinone biosynthesis protein, family bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
radical SAM domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2464_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1888..2388
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_5_b1_sep16_scaffold_2464_4
unknown

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comp(2415..3299)
DNA (885bp) protein (295aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2464_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3334..5838)
DNA (2505bp) protein (835aa)
alias=16ft_combo_ws3_scaffold_1020_48 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2464_6
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6005..8089
DNA (2085bp) protein (695aa)
Outer membrane cobalamin receptor protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFD2_AZOSU
outer membrane cobalamin receptor protein
Tax=CG_Ignavi_02
PLM4_5_b1_sep16_scaffold_2464_7
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(8096..9646)
DNA (1551bp) protein (517aa)
hypothetical protein bin=RAAC11 species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
Tax=RBG_13_Chloroflexi_54_9_curated
PLM4_5_b1_sep16_scaffold_2464_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

9741..10637
DNA (897bp) protein (299aa)
DNA repair photolyase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q117_9FIRM bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
radical SAM protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2464_9
unknown

Not on your lists

comp(10634..11029)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 9 items

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