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PLM4_5_b1_sep16_scaffold_2885

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2885_1
unknown

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1..255
DNA (255bp) protein (85aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2885_2
unknown

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305..517
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2885_3
unknown

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745..1737
DNA (993bp) protein (331aa)
TonB-dependent receptor plug
PLM4_5_b1_sep16_scaffold_2885_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2107..3642
DNA (1536bp) protein (512aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Putative formiminotransferase-cyclodeaminase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3Z1_ANATU bin=16ft_combo_ws3_JS1 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2885_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3724..5802
DNA (2079bp) protein (693aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F0_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2885_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5802..6647
DNA (846bp) protein (282aa)
PHP domain-containing protein Tax=Paenibacillus alvei DSM 29 RepID=K4ZN77_PAEAL bin=16ft_combo_ws3_JS1 species=Paenibacillus alvei genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
PHP domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2885_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6790..7278
DNA (489bp) protein (163aa)
id=5224983 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2885_8
unknown

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7275..7877
DNA (603bp) protein (201aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2885_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7874..8893
DNA (1020bp) protein (340aa)
alias=16ft_combo_ws3_scaffold_427_9 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2885_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8923..9366
DNA (444bp) protein (148aa)
Competence protein ComEA Tax=uncultured candidate division OP1 bacterium RepID=H5SC70_9BACT bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Competence protein ComEA-like protein with helix-hairpin-helix repeat region
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2885_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

9601..11235
DNA (1635bp) protein (545aa)
Type IV pilus biogenesis ATPase PilB Tax=Geobacter RepID=Q39VU7_GEOMG bin=16ft_combo_ws3_JS1 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
pilB; type IV pilus biogenesis ATPase PilB
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 11 items

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