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PLM4_5_b1_sep16_scaffold_17103

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_17103_1
unknown

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3..245
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_17103_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(309..902)
DNA (594bp) protein (198aa)
LemA family protein Tax=uncultured candidate division OP1 bacterium RepID=H5SRD4_9BACT bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
LemA family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_17103_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(981..1829)
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CIW3_METED bin=16ft_combo_ws3_JS1 species=Methylobacterium extorquens genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_17103_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1826..2482)
DNA (657bp) protein (219aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI0_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_17103_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2515..4656)
DNA (2142bp) protein (714aa)
PAS domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hybrid histidine kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_17103_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5296..6516
DNA (1221bp) protein (407aa)
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit family protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9V2_ACIC5 bin=16ft_combo_ws3_JS1 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-oxoacid:ferredoxin/flavodoxin oxidoreductase subunit gamma family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_17103_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6513..7586
DNA (1074bp) protein (358aa)
Thiamine pyrophosphate protein domain protein TPP-binding Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEP4_ANADF bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

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