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PLM4_5_b1_sep16_scaffold_5270

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5270_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..938)
DNA (936bp) protein (312aa)
Inner-membrane translocator Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT65_HALO1 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC-type transporter, integral membrane subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_5270_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(935..2461)
DNA (1527bp) protein (509aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_5270_3
GWA1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

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2640..5414
DNA (2775bp) protein (925aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI00038207EF
Glycosyl hydrolase 38 domain protein {ECO:0000313|EMBL:KKS85478.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_43_11.;"
glycoside hydrolase family protein
PLM4_5_b1_sep16_scaffold_5270_4
unknown

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5550..5771
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5270_5
unknown

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5812..6261
DNA (450bp) protein (150aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5270_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(6173..7273)
DNA (1101bp) protein (367aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
serine phosphatase RsbU
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_5_b1_sep16_scaffold_5270_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7270..8094)
DNA (825bp) protein (275aa)
Beta-lactamase domain protein Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C075_XYLCX
beta-lactamase domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_5270_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8091..8996)
DNA (906bp) protein (302aa)
Basic membrane lipoprotein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QTA3_CHLT3
basic membrane lipoprotein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_5270_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(8947..9636)
DNA (690bp) protein (230aa)
Thymidine kinase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHU3_IGNAJ
tdk; thymidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_5_b1_sep16_scaffold_5270_10
unknown

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comp(9755..10576)
DNA (822bp) protein (274aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5270_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(10615..10887)
DNA (273bp) protein (91aa)
Sulphate transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QD1_SOLUE
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AIE85006.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying 11 items

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