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PLM4_5_b1_sep16_scaffold_13458

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_13458_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..512)
DNA (510bp) protein (170aa)
protease Do (EC:3.4.21.108)
Pdz/Dhr/GlgF Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX6_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_13458_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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646..2022
DNA (1377bp) protein (459aa)
23S rRNA (Uracil-5-)-methyltransferase RumA Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEY8_SYNFM bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RNA methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_13458_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2034..2795
DNA (762bp) protein (254aa)
id=5223477 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_13458_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2755..3582)
DNA (828bp) protein (276aa)
Probable cytosol aminopeptidase Tax=uncultured candidate division OP1 bacterium RepID=H5SS43_9BACT bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
pepA; cytosolic aminopeptidase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 4 items

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