ggKbase home page

PLM4_5_b1_sep16_scaffold_3938_12

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(8159..9496)

Top 3 Functional Annotations

Value Algorithm Source
tolB; protein TolB; K03641 TolB protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 422.0
  • Bit_score: 503
  • Evalue 1.20e-139
biopolymer transport TolB-like protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 381.0
  • Bit_score: 288
  • Evalue 2.90e-75
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 422.0
  • Bit_score: 503
  • Evalue 1.70e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1338
ATGAGCGCGCGACGTCTGCCCCGGTACCTGGTCGCCGCTCTGGTGCTTCCGGGTCTCATCGGCCTGGTGCTGATGGCCCCGCGCTCCGGTCGTGCGCAATCCGACGTGCGGATCGACATCAAGGGTTCCGGAACGCGGATGAAGATCTGGATGGAGCCGCTCAAGCCGGAAGGCGATCGTCACTCCTCGAACTTCGCGCTCCAGGCCGACGAGGTGCTGGCCAGCGATCTCACCGCCTCGGCGGTGTTCCGGGTGGCGCGCCAGGGGATCGACAGCCCGCCGTCGGATGCGCAGGTGGTCGTGCACGGCAGCTTCAAGGTCGACGGTCAGCGACTCCGCCTGGTCGGCGAGATCCACGACCTGCCCGGCCGCCGGCCGGTGTTCGCCAAGGAGTACAGCTCGGCGCTCAGCGACTGGCGCGCGTTGACCCACGCGTTCGCCGACGACGTGGTGCTCGCACTCACCGGCGAGGCGGGCGTCGCCAGCTCGCGGATCGCGTTCATCGCCCAGAACGGCAGGGAGAAGGAGCTGTGGCTGATGGACGCCGACGGCGCACGCGCCACGCAGATGACGCGCGACCGGTCGATCGCCCAGTCACCATCGTGGGCGCCGGACGGGTCCCTCATCCTGTTCACGTCGTACCGATCCGGCACCGGAACCCGCATCTACGTCATGCCGGGCGCGGGCGGGAGGGTCTACCAGGTCTCGGCGCGCGCGGGTCTCAACACCAGCGCGATGTATTCGCCCGATGGGCGCGAGATCGCGGCCACCCTCAGCTACGAAGGAAACTCCGAGGTCTACGTGATGGACGCGCGGGGCGGCTCGCCGCGGCGACTCACCAACCACCGCAGCATCGACACGTCGCCGAGCTGGTCGCCGACCGGGCGCGAGATCGCGTTCACGTCGGATCGCTCGGGGGCGCCGCAGGTGTACGTGATGAACAAGGATGGCAGCGATGTTCGGCGGCTCACCTACGATCTCGGATACACCGATTCGCCGGCCTGGTCGCCCAAGGGGGATCGCATCGCATTCGTCTCGCGGGCCGGCGCGGGGTTCGAGATCCAGACCTGCCGACCGGACGGCAGCGACCTTCGACTTGTAGTCTCCGGCGGGAGTAACGAGAATCCCCGCTGGTCACCGGACGGCCGCCATCTGGTGTTCGCATCGAACCGCGGTGGTGCCTTCGGGTTGTATGTAACGGATCTGGATGGTTCGTCACCGAGGAAACTCGATACGGGCGGCCGCATCGCCCTGTCGCCAGCGTGGTCGCCGCGACTGACGCCGCCGGGCAGGATGACGGCCCGCGTCGGTCAATCGGTCCAGGGAGGTACCCGATGA
PROTEIN sequence
Length: 446
MSARRLPRYLVAALVLPGLIGLVLMAPRSGRAQSDVRIDIKGSGTRMKIWMEPLKPEGDRHSSNFALQADEVLASDLTASAVFRVARQGIDSPPSDAQVVVHGSFKVDGQRLRLVGEIHDLPGRRPVFAKEYSSALSDWRALTHAFADDVVLALTGEAGVASSRIAFIAQNGREKELWLMDADGARATQMTRDRSIAQSPSWAPDGSLILFTSYRSGTGTRIYVMPGAGGRVYQVSARAGLNTSAMYSPDGREIAATLSYEGNSEVYVMDARGGSPRRLTNHRSIDTSPSWSPTGREIAFTSDRSGAPQVYVMNKDGSDVRRLTYDLGYTDSPAWSPKGDRIAFVSRAGAGFEIQTCRPDGSDLRLVVSGGSNENPRWSPDGRHLVFASNRGGAFGLYVTDLDGSSPRKLDTGGRIALSPAWSPRLTPPGRMTARVGQSVQGGTR*