ggKbase home page

PLM4_5_b1_sep16_scaffold_5533_4

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3735..4856

Top 3 Functional Annotations

Value Algorithm Source
pilus retraction protein PilT; K02669 twitching motility protein PilT bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 373.0
  • Bit_score: 573
  • Evalue 1.40e-160
twitching motility protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 345.0
  • Bit_score: 296
  • Evalue 9.00e-78
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 373.0
  • Bit_score: 573
  • Evalue 1.90e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1122
ATGACCGGACTGGCTCTCGAACGTGATGCAATCCTGCGCCGTGCGTTTGAGCTCGGCGCATCGGATGTGCTCATCACTGCCGGCCAGCCAGTGCTCGTGATGATTGCCGGCGCGCTCCAGGCGATGCCGGATTCGCCGATGCTCGGCGCGGTCGAGTCGCGCCGCCTGGCGGAGAGCTTCATGACTCCCGCCCTGCACGAGAAGTTCCTGCGCGATCTGGAGCTGGACACCCGGTACGAGCTGCCGGGCATCGCGAACTTCCGCATCAACGTATTCATTCAGCGTGGCCAGTGGGGGGCGGCGATCCGTATCGTGCCGCTCACGATCCCCCTGCCCGGCGAGCTTGGCCTCGCCCCCCATGTGGTCACGCGTCTGCTCGGCATCTCCCGCGGTCTGATCCTGGTGACGGGACCGACCGGGGCCGGCAAGTCCACCACCATCGCGTCGCTGCTCGAGCAGCAGAACCAGCACGGAGCACGGCGCCACATCGTGACGGTCGAGGACCCGATCGAGTTCGTGTTCACGCCGCGCAACGCGGTGTTCGACCAGCGCGAAGTGGGAACCGACACGAAGAGCTATGCGCGCGGCCTCAAGGGCGCCCTGCGCCAGCTTCCGCACATCATCTTCGTCGGCGAGATGCGCGACCTCACCAGCATGGCGATCGCGCTGTCGGCGGCCGAGACCGGCAACCTGGTGATCTCGACCATGGCCACGCAGTCGGCGTCCCAGACCGTGACCCGCATCGTCGACTCGTTCCCGCCCCACCAGCAGTCGCAGATCCGTTCGCAGCTGTCGCTGACGCTCAAGGCGGTGGTGTCGCAGATCCTGCTGCCGCGCGCCGACGGCCGGCACCGGGTCGCGGCGCGCGAGATCATGTTCGTGAATCAGCCGATCTCGAACCTGATTCGCGAGGACAAGATCCACCAGATCCCGAACGTGATCTCGACCAGCCTGCGCGAGGACATGGTGTCGCTCGACGACTCGCTGACCGAGCTGGTCGACCGCGGAACGATTGCGTTCGAGACCGCCCACCCCTACTTCGAAGACGTCGAGAAGCGGGCCACGCTGCAGAAGCGCGTCTACCGTCCCGCTCCGATGGCCGGCGTTCCGGGAGCCCGGTGA
PROTEIN sequence
Length: 374
MTGLALERDAILRRAFELGASDVLITAGQPVLVMIAGALQAMPDSPMLGAVESRRLAESFMTPALHEKFLRDLELDTRYELPGIANFRINVFIQRGQWGAAIRIVPLTIPLPGELGLAPHVVTRLLGISRGLILVTGPTGAGKSTTIASLLEQQNQHGARRHIVTVEDPIEFVFTPRNAVFDQREVGTDTKSYARGLKGALRQLPHIIFVGEMRDLTSMAIALSAAETGNLVISTMATQSASQTVTRIVDSFPPHQQSQIRSQLSLTLKAVVSQILLPRADGRHRVAAREIMFVNQPISNLIREDKIHQIPNVISTSLREDMVSLDDSLTELVDRGTIAFETAHPYFEDVEKRATLQKRVYRPAPMAGVPGAR*