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PLM4_32_b1_sep16_scaffold_1035

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1035_27
unknown

Not on your lists

comp(28727..29125)
DNA (399bp) protein (133aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_28
unknown

Not on your lists

comp(29692..30078)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_29
unknown

Not on your lists

comp(30104..30340)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003712367
hypothetical protein
PLM4_32_b1_sep16_scaffold_1035_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(30344..31210)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDA8_RHOM4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_32_b1_sep16_scaffold_1035_31
unknown

Not on your lists

comp(31245..31616)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_32
unknown

Not on your lists

comp(31874..32614)
DNA (741bp) protein (247aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_33
unknown

Not on your lists

32715..32930
DNA (216bp) protein (72aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_34
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32966..33487
DNA (522bp) protein (174aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKC1_HALO1
Zn-dependent hydrolase
Zn-dependent hydrolase of the beta-lactamase fold-like protein {ECO:0000313|EMBL:ACY13155.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_32_b1_sep16_scaffold_1035_35
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

33570..34466
DNA (897bp) protein (299aa)
L-proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase Tax=Caldithrix abyssi DSM 13497 RepID=H1XT27_9BACT
Tax=RBG_13_Caldithrix_44_9_curated
PLM4_32_b1_sep16_scaffold_1035_36
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

34797..35255
DNA (459bp) protein (153aa)
Methyltransferase family protein bin=GWA2_Ignavibacteria_55_11 species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_32_b1_sep16_scaffold_1035_37
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35270..36433)
DNA (1164bp) protein (388aa)
Microsomal dipeptidase {ECO:0000313|EMBL:KIV63930.1}; EC=3.4.13.19 {ECO:0000313|EMBL:KIV63930.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
hypothetical protein Tax=Pseudomonas thermotolerans RepID=UPI00037542FF
peptidase M19, renal dipeptidase
PLM4_32_b1_sep16_scaffold_1035_38
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(36979..38490)
DNA (1512bp) protein (504aa)
Serine phosphatase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S47_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Serine phosphatase RsbU subunit sigma
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_1035_39
unknown

Not on your lists

38602..38757
DNA (156bp) protein (52aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_40
candidate division Zixibacteria, Bacteria

Not on your lists

39616..40281
DNA (666bp) protein (222aa)
hypothetical protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Uncharacterized protein {ECO:0000313|EMBL:EQB63591.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
PLM4_32_b1_sep16_scaffold_1035_41
Parcubacteria bacterium GW2011_GWE1_43_8, Parcubacteria, Bacteria

Not on your lists

40294..40680
DNA (387bp) protein (129aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Uncharacterized protein {ECO:0000313|EMBL:KKT22133.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_43_8.;"
PLM4_32_b1_sep16_scaffold_1035_42
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(40806..43295)
DNA (2490bp) protein (830aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_00049};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Leucine--tRNA ligase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=SYL_MOOTA
PLM4_32_b1_sep16_scaffold_1035_43
unknown

Not on your lists

comp(43341..43568)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1035_44
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(43594..44661)
DNA (1068bp) protein (356aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
hypothetical protein Tax=Bacillus sp. ZYK RepID=UPI00030D9871
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM4_32_b1_sep16_scaffold_1035_45
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(44663..45187)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH69_IGNAJ bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_13_WOR_2_41_10_curated
PLM4_32_b1_sep16_scaffold_1035_46
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(45156..46301)
DNA (1146bp) protein (382aa)
Sigma-54-dependent transcriptional response regulator Tax=Geobacter RepID=Q39Y76_GEOMG bin=16ft_combo_ws3_JS1 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sigma-54-dependent transcriptional response regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_1035_47
Planococcus donghaensis, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(46298..46564)
DNA (267bp) protein (89aa)
Sporulation initiation phosphotransferase F Tax=Planococcus donghaensis MPA1U2 RepID=E7RL33_9BACL
Sporulation initiation phosphotransferase F {ECO:0000313|EMBL:EGA88225.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus donghaensis MPA1U2.;"
two component, sigma54 specific, Fis family transcriptional regulator
PLM4_32_b1_sep16_scaffold_1035_48
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(46524..48602)
DNA (2079bp) protein (693aa)
two component system sensor histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RCT9_DESPD bin=16ft_combo_ws3_JS1 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_1035_49
RLO_PLX_64_10, Bacteria

Not on your lists

comp(48620..49876)
DNA (1257bp) protein (419aa)
ABC transporter related Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XL5_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_1035_50
RLO_PLX_64_10, Bacteria

Not on your lists

comp(49886..50692)
DNA (807bp) protein (269aa)
ABC-2 type transporter bin=GWC2_CP_Nitrospirae-rel_42_7 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_1035_51
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50689..51348)
DNA (660bp) protein (220aa)
LmbE family protein Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BD30_MEISD
LmbE family protein
Tax=RBG_16_Gamma2_60_9_curated
PLM4_32_b1_sep16_scaffold_1035_52
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(51345..52094)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034CD386
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KIJ84455.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
PLM4_32_b1_sep16_scaffold_1035_53
GWB1_OD1_42_17, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(52156..53217)
DNA (1062bp) protein (354aa)
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKS44906.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_42_17.;"
CDP-glucose 4,6-dehydratase bin=GWF2_Lentisphaerae_38_69 species=uncultured Sulfuricurvum sp. RIFRC-1 genus=Sulfuricurvum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hypothetical protein
PLM4_32_b1_sep16_scaffold_1035_54
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53274..54506)
DNA (1233bp) protein (411aa)
C-methyltransferase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR35_HALH1
C-methyltransferase
C-methyltransferase {ECO:0000313|EMBL:AEE53273.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM4_32_b1_sep16_scaffold_1035_55
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54557..55804)
DNA (1248bp) protein (416aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0003159FAB
Uncharacterized protein {ECO:0000313|EMBL:ETW94037.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1035_56
RLO_PLX_64_10, Bacteria

Not on your lists

comp(55801..56679)
DNA (879bp) protein (293aa)
UPI0003D79F08 related cluster Tax=unknown RepID=UPI0003D79F08
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying items 31-60 of 69 in total

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