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PLM4_32_b1_sep16_scaffold_1332

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1332_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1212
DNA (1212bp) protein (404aa)
Integral membrane sensor signal transduction histidine kinase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT7_SYNFM
integral membrane sensor signal transduction histidine kinase
Tax=GWA2_Burkholderiales_64_37_curated
PLM4_32_b1_sep16_scaffold_1332_2
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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1350..2024
DNA (675bp) protein (225aa)
OmpA/MotB domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XER4_9BACT
Flagellar motor protein
Tax=CG_Deferri_01
PLM4_32_b1_sep16_scaffold_1332_3

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comp(2118..4142)
DNA (2025bp) protein (675aa)
Putative peptidase family M1 Tax=uncultured marine microorganism HF4000_APKG2M17 RepID=B3T6S6_9ZZZZ
Putative peptidase family M1 {ECO:0000313|EMBL:ABZ08285.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG2M17.;"
pepN; Aminopeptidase N
PLM4_32_b1_sep16_scaffold_1332_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4271..5227
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8K0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17222.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
polyphosphate-dependent ADP kinase
PLM4_32_b1_sep16_scaffold_1332_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5294..7003
DNA (1710bp) protein (570aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin bin=GWC2_Methylomirabilis_70_16 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1332_6
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7023..8627
DNA (1605bp) protein (535aa)
UPI0003CFE63F related cluster Tax=unknown RepID=UPI0003CFE63F
Uncharacterized protein {ECO:0000313|EMBL:ESZ06308.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
PLM4_32_b1_sep16_scaffold_1332_7
unknown

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8650..8898
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1332_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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8927..9454
DNA (528bp) protein (176aa)
OsmC family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W18_SOLUE
OsmC family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_1332_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9457..9999
DNA (543bp) protein (181aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:ABJ86146.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABJ86146.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Demethylmenaquinone methyltransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W19_SOLUE
PLM4_32_b1_sep16_scaffold_1332_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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9996..10229
DNA (234bp) protein (78aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Methyltransferase Tax=Algoriphagus machipongonensis RepID=A3I2N4_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_32_b1_sep16_scaffold_1332_11
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10512..10835)
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DCA5_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF86293.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM4_32_b1_sep16_scaffold_1332_12
CSP1_5_NC10, NC10, Bacteria

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10873..11595
DNA (723bp) protein (241aa)
Endonuclease III bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative endoIII-related endonuclease
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_1332_13
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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11669..12664
DNA (996bp) protein (332aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
PPIC-type PPIASE domain protein Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQC8_SPITD
PPIC-type PPIASE domain-containing protein
PLM4_32_b1_sep16_scaffold_1332_trna_1
unknown

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12655..12726
DNA (72bp)
transferRNA Val
PLM4_32_b1_sep16_scaffold_1332_14
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

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comp(12774..15074)
DNA (2301bp) protein (767aa)
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
PLM4_32_b1_sep16_scaffold_1332_15
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(15109..15876)
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=GTPC1_PYRAB
hypothetical protein
Tax=CG_Anaero_02
PLM4_32_b1_sep16_scaffold_1332_16
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15885..19517)
DNA (3633bp) protein (1211aa)
protein kinase (EC:2.7.11.1) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Fis family transcriptional regulator
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Displaying 17 items

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