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PLM4_32_b1_sep16_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_268_1
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..211
DNA (210bp) protein (70aa)
ExbB: biopolymer transport protein Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NN57_DESTT
exbB; biopolymer transport protein ExbB
ExbB: biopolymer transport protein {ECO:0000313|EMBL:CCK81443.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
PLM4_32_b1_sep16_scaffold_268_2
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232..648
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QJB3_DESB2
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADK85656.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
PLM4_32_b1_sep16_scaffold_268_3
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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652..1287
DNA (636bp) protein (212aa)
TonB-like Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K023_DESAC
TonB-like {ECO:0000313|EMBL:EAT15719.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
TonB family protein
PLM4_32_b1_sep16_scaffold_268_4
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1947..2531
DNA (585bp) protein (195aa)
Tetratricopeptide repeat protein Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJ05_DESTT
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CCK81446.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
PLM4_32_b1_sep16_scaffold_268_5
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2700..3704
DNA (1005bp) protein (335aa)
Phosphate ABC transporter periplasmic phosphate-binding protein Tax=Rhodopirellula sallentina SM41 RepID=M5U5E8_9PLAN
phosphate ABC transporter substrate-binding protein, phot family
Phosphate ABC transporter periplasmic phosphate-binding protein {ECO:0000313|EMBL:EMI53086.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
PLM4_32_b1_sep16_scaffold_268_6
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3777..6305
DNA (2529bp) protein (843aa)
Phosphate ABC transporter, permease protein Tax=Rhodopirellula sallentina SM41 RepID=M5TV87_9PLAN
Phosphate ABC transporter, permease protein {ECO:0000313|EMBL:EMI53085.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
ABC-type uncharacterized transport system, permease component
PLM4_32_b1_sep16_scaffold_268_7
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6332..8044
DNA (1713bp) protein (571aa)
Phosphate transport system permease protein PstA Tax=Rhodopirellula sallentina SM41 RepID=M5TVK0_9PLAN
Phosphate transport system permease protein PstA {ECO:0000313|EMBL:EMI53084.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
phosphate ABC transporter, permease protein PstA
PLM4_32_b1_sep16_scaffold_268_8
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8308..9144
DNA (837bp) protein (279aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
ATP-binding component of ABC phosphate transporter Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ49_9PLAN
phosphate ABC transporter ATPase
PLM4_32_b1_sep16_scaffold_268_9
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9225..9941
DNA (717bp) protein (239aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDN4_DESTA
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=GWA2_Deltaproteobacteria_45_12_curated
PLM4_32_b1_sep16_scaffold_268_10
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9943..11745
DNA (1803bp) protein (601aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
PAS/PAC sensor signal transduction histidine kinase Tax=Psychromonas ingrahamii (strain 37) RepID=A1ST64_PSYIN
hypothetical protein
PLM4_32_b1_sep16_scaffold_268_11
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11796..12479
DNA (684bp) protein (228aa)
Phosphate-specific transport system accessory protein PhoU Tax=Rhodopirellula europaea 6C RepID=M2A4C6_9PLAN
phoU; phosphate transporter PhoU
Tax=GWA2_Deltaproteobacteria_45_12_curated
PLM4_32_b1_sep16_scaffold_268_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

12592..13749
DNA (1158bp) protein (386aa)
periplasmic serine protease (EC:3.4.21.-)
hypothetical protein bin=bin3_NC10 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_268_13
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13808..14566
DNA (759bp) protein (253aa)
membrane protein Tax=Salinispora arenicola RepID=UPI000361229A
Membrane protein {ECO:0000313|EMBL:CKI30490.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_268_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14591..15778
DNA (1188bp) protein (396aa)
Xaa-Pro aminopeptidase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHV1_SINAD
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AGA28842.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_32_b1_sep16_scaffold_268_15
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

15790..16332
DNA (543bp) protein (181aa)
Putative uncharacterized protein Tax=Oceanicaulis sp. HTCC2633 RepID=A3UK34_9RHOB bin=RAAC39 species=Oceanicaulis sp. HTCC2633 genus=Oceanicaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria
Tax=RBG_13_Caldithrix_44_9_curated
PLM4_32_b1_sep16_scaffold_268_16
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16329..16850
DNA (522bp) protein (174aa)
Putative uncharacterized protein Tax=Chloroflexus RepID=A9WK54_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY34505.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM4_32_b1_sep16_scaffold_268_17
bacterium UASB270, Bacteria

Not on your lists

16847..18247
DNA (1401bp) protein (467aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
RNA methylase Tax=Desulfococcus multivorans DSM 2059 RepID=S7TWS5_DESML
Putative RNA methylase family protein {ECO:0000313|EMBL:GAK60315.1}; species="Bacteria.;" source="bacterium UASB270.;"
PLM4_32_b1_sep16_scaffold_268_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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18295..20517
DNA (2223bp) protein (741aa)
APHP domain protein Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C333_DELAS bin=16ft_combo_ws3_JS1 species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
GLUG domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_268_19
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20676..21092
DNA (417bp) protein (139aa)
Protein chain release factor B Tax=Thioflavicoccus mobilis 8321 RepID=L0GZ24_9GAMM
protein chain release factor B
Protein chain release factor B {ECO:0000313|EMBL:AGA91087.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
PLM4_32_b1_sep16_scaffold_268_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21337..21603
DNA (267bp) protein (89aa)
anti-sigma regulatory factor, serine/threonine protein kinase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cache/SpoIIE domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_268_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21603..21887
DNA (285bp) protein (95aa)
Stage II sporulation protein bin=GWC2_Ignavibacteria_56_12 species=Helcococcus kunzii genus=Helcococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
SpoIIAA; anti-anti-sigma regulatory factor
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_32_b1_sep16_scaffold_268_22
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21969..22514
DNA (546bp) protein (182aa)
RNA polymerase sigma factor Tax=Caldithrix abyssi DSM 13497 RepID=H1XX72_9BACT bin=RAAC39 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria
rpoE1; RNA polymerase sigma-E factor
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM4_32_b1_sep16_scaffold_268_23
unknown

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22511..23203
DNA (693bp) protein (231aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_268_24
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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23332..24408
DNA (1077bp) protein (359aa)
PREDICTED: A-kinase anchor protein 5 isoform X2 Tax=Zonotrichia albicollis RepID=UPI0003942ADB
Segregation and condensation protein A {ECO:0000313|EMBL:AKF06595.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PLM4_32_b1_sep16_scaffold_268_25
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

24529..27480
DNA (2952bp) protein (984aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteriae_55_25 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
PLM4_32_b1_sep16_scaffold_268_26
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27488..28492
DNA (1005bp) protein (335aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_32_b1_sep16_scaffold_268_27
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28565..28915
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WBD6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB91081.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
Glyoxalase-like domain protein
PLM4_32_b1_sep16_scaffold_268_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28945..30144
DNA (1200bp) protein (400aa)
Formate dehydrogenase (EC:1.2.1.2)
Formate dehydrogenase Tax=Sinorhizobium meliloti (strain AK83) RepID=F6ECH4_SINMK
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFC70131.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PLM4_32_b1_sep16_scaffold_268_29
unknown

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comp(30290..30496)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_268_30
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(30502..30834)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I0A5_9LEPT
Activator of Hsp90 ATPase 1 family protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying items 1-30 of 97 in total

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