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PLM4_32_b1_sep16_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_332_1
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Bacteria RepID=UPI00037BCD88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY59509.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM4_32_b1_sep16_scaffold_332_2
unknown

Not on your lists

1187..1414
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_332_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1507..2415)
DNA (909bp) protein (303aa)
phenazine biosynthesis protein PhzF family protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
phenazine biosynthesis protein PhzF family protein
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_332_4
unknown

Not on your lists

2675..3622
DNA (948bp) protein (316aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_332_5

Not on your lists

3628..5013
DNA (1386bp) protein (462aa)
hypothetical protein Tax=unclassified Cloacimonetes RepID=UPI0003619A9E
Marine sediment metagenome DNA, contig: S01H1_L09226 {ECO:0000313|EMBL:GAF99102.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_332_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(5038..6315)
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y1W0_SORCE
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_32_b1_sep16_scaffold_332_7
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6312..7076)
DNA (765bp) protein (255aa)
Glycerophosphoryl diester phosphodiesterase Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MM54_CALBD
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KHK04418.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
glycerophosphoryl diester phosphodiesterase
PLM4_32_b1_sep16_scaffold_332_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7767..8795)
DNA (1029bp) protein (343aa)
Choloylglycine hydrolase Tax=Caldithrix abyssi DSM 13497 RepID=H1XV49_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX05327.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hydrolase
PLM4_32_b1_sep16_scaffold_332_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8810..9709)
DNA (900bp) protein (300aa)
Putative phosphatase Tax=Caulobacter sp. AP07 RepID=J2Q100_9CAUL
Putative phosphatase {ECO:0000313|EMBL:EJL33797.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
phosphatase
PLM4_32_b1_sep16_scaffold_332_10
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10117..10569)
DNA (453bp) protein (151aa)
DinB family protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R5I5_PIRSD
Damage-inducible protein DinB {ECO:0000313|EMBL:KIL39886.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
DinB family protein
PLM4_32_b1_sep16_scaffold_332_11
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10590..12464)
DNA (1875bp) protein (625aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI00034658AE
aminopeptidase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_32_b1_sep16_scaffold_332_12
unknown

Not on your lists

comp(12483..13205)
DNA (723bp) protein (241aa)
Abortive infection protein Tax=Methanotorris formicicus Mc-S-70 RepID=H1L025_9EURY
PLM4_32_b1_sep16_scaffold_332_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13307..14320)
DNA (1014bp) protein (338aa)
Thiamine-monophosphate kinase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3R9_DESAT bin=16ft_combo_ws3_JS1 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
thiamine-monophosphate kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_332_14
Selaginella moellendorffii, Selaginella, Selaginellales, Lycopodiidae, Streptophyta, Viridiplantae

Not on your lists

14664..15584
DNA (921bp) protein (307aa)
Putative uncharacterized protein Tax=Selaginella moellendorffii RepID=D8SCQ0_SELML
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ17750.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella.;" source="Selaginella moellendorffii (Spikemoss).;"
Rieske (2Fe-2S) domain-containing protein
PLM4_32_b1_sep16_scaffold_332_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15693..16088
DNA (396bp) protein (132aa)
Putative Transcription factor IscR Tax=Candidatus Nitrospira defluvii RepID=D8P860_9BACT
putative transcription factor IscR
Putative Transcription factor IscR {ECO:0000313|EMBL:CBK43692.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_32_b1_sep16_scaffold_332_16
unknown

Not on your lists

16091..16594
DNA (504bp) protein (168aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_332_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16596..17873
DNA (1278bp) protein (426aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
glycine cleavage system t protein (EC:2.1.2.10)
Uncharacterized protein {ECO:0000313|EMBL:ETW96529.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_32_b1_sep16_scaffold_332_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

17866..18399
DNA (534bp) protein (178aa)
phosphohydrolase Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A67F01
metal dependent phosphohydrolase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_32_b1_sep16_scaffold_332_19
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18410..18769)
DNA (360bp) protein (120aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DG78_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF86884.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM4_32_b1_sep16_scaffold_332_20
unknown

Not on your lists

comp(18786..19418)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_332_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19426..20817)
DNA (1392bp) protein (464aa)
cell envelope protein Tax=Rhizobium leguminosarum RepID=UPI000367FBAC
Uncharacterized protein {ECO:0000313|EMBL:EJC67052.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
cell envelope protein
PLM4_32_b1_sep16_scaffold_332_22
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20900..21115)
DNA (216bp) protein (72aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_32_b1_sep16_scaffold_332_23
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(21119..21850)
DNA (732bp) protein (244aa)
hypothetical protein bin=GWA2_OP3_53_43 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_32_b1_sep16_scaffold_332_24
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21847..22899)
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000361B766
heat shock protein
Uncharacterized protein {ECO:0000313|EMBL:AJE19903.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
PLM4_32_b1_sep16_scaffold_332_25
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(22896..23726)
DNA (831bp) protein (277aa)
Pseudouridine synthase Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U0T7_9DELT
rluD; RNA pseudouridine synthase family protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
PLM4_32_b1_sep16_scaffold_332_26
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(23883..24926)
DNA (1044bp) protein (348aa)
Branched-chain amino acid aminotransferase Tax=Caldithrix abyssi DSM 13497 RepID=H1XTN6_9BACT
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EHO41511.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
branched-chain amino acid aminotransferase
PLM4_32_b1_sep16_scaffold_332_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25068..25901
DNA (834bp) protein (278aa)
hypothetical protein Tax=Anaeromusa acidaminophila RepID=UPI0003795952
Putative pyridine nucleotide-linked oxidoreductase {ECO:0000313|EMBL:EJW13287.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ferredoxin-NADP(+) reductase subunit alpha
PLM4_32_b1_sep16_scaffold_332_28
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25911..27677
DNA (1767bp) protein (589aa)
PHP domain protein Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BFQ2_PETMO
phosphotransferase domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM4_32_b1_sep16_scaffold_332_29
unknown

Not on your lists

27670..28470
DNA (801bp) protein (267aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_332_30
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28499..29284
DNA (786bp) protein (262aa)
endonuclease III/DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III Tax=Streptomyces albulus CCRC 11814 RepID=S0HQE0_STRA9
Tax=RBG_13_Planctomycetes_63_9_curated
Displaying items 1-30 of 99 in total

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