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PLM4_32_b1_sep16_scaffold_336

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_336_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_336_trna_3
unknown

Not on your lists

comp(152..225)
DNA (74bp)
transferRNA Met
PLM4_32_b1_sep16_scaffold_336_2
unknown

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437..1000
DNA (564bp) protein (188aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_336_3
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1231..2241
DNA (1011bp) protein (337aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
ketol-acid reductoisomerase Tax=Paenibacillus daejeonensis RepID=UPI00037A8730
PLM4_32_b1_sep16_scaffold_336_4
unknown

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2238..3149
DNA (912bp) protein (304aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_336_5
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

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comp(3191..4414)
DNA (1224bp) protein (408aa)
O-succinylhomoserine sulfhydrylase Tax=Zea mays RepID=B6UAU8_MAIZE
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:ACG46481.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Zea.;" source="Zea mays (Maize).;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
PLM4_32_b1_sep16_scaffold_336_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4411..5760)
DNA (1350bp) protein (450aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09B83_STIAD
protein of unknown function DUF1212
Uncharacterized protein {ECO:0000313|EMBL:AHG89291.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_336_trna_1
unknown

Not on your lists

5849..5919
DNA (71bp)
transferRNA Gln
PLM4_32_b1_sep16_scaffold_336_7
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5934..6587)
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URP7_9AQUI
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
PLM4_32_b1_sep16_scaffold_336_8
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(6625..7065)
DNA (441bp) protein (147aa)
BadM/Rrf2 family transcriptional regulator Tax=uncultured candidate division OP1 bacterium RepID=H5SR16_9BACT
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:BAL58533.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
BadM/Rrf2 family transcriptional regulator
PLM4_32_b1_sep16_scaffold_336_trna_2
unknown

Not on your lists

7189..7260
DNA (72bp)
transferRNA Glu
PLM4_32_b1_sep16_scaffold_336_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7339..8193
DNA (855bp) protein (285aa)
Methyltransferase type 11 Tax=Marichromatium purpuratum 984 RepID=F9U123_MARPU
Uncharacterized protein {ECO:0000313|EMBL:AKF04709.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
methyltransferase
PLM4_32_b1_sep16_scaffold_336_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8277..9704
DNA (1428bp) protein (476aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI0003619868
Rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEN72198.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM4_32_b1_sep16_scaffold_336_11
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

9736..10737
DNA (1002bp) protein (334aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
2-dehydropantoate 2-reductase Tax=Rhodococcus opacus RepID=UPI00029CC751
PLM4_32_b1_sep16_scaffold_336_12
unknown

Not on your lists

10734..12410
DNA (1677bp) protein (559aa)
Tetratricopeptide TPR_2 repeat protein Tax=Geobacillus sp. G11MC16 RepID=B4BMK5_9BACI
hypothetical protein
PLM4_32_b1_sep16_scaffold_336_13
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12464..13714)
DNA (1251bp) protein (417aa)
Glutamate dehydrogenase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHW9_HALO1
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
Glu/Leu/Phe/Val dehydrogenase
PLM4_32_b1_sep16_scaffold_336_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14764..15312
DNA (549bp) protein (183aa)
Arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
arginine decarboxylase, pyruvoyl-dependent (EC:4.1.1.19)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_32_b1_sep16_scaffold_336_15
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

15317..16321
DNA (1005bp) protein (335aa)
speB; agmatinase (EC:3.5.3.11)
agmatinase Tax=Psychroflexus tropicus RepID=UPI000380B966
Tax=RBG_16_Planctomycetes_43_13_curated
PLM4_32_b1_sep16_scaffold_336_16
unknown

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comp(16302..16616)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_336_17
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16655..17893)
DNA (1239bp) protein (413aa)
Arabinose efflux permease family protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PHE7_DESSD
arabinose efflux permease family protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_32_b1_sep16_scaffold_336_18
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

18004..19053
DNA (1050bp) protein (350aa)
Tripartite motif-containing protein 71 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
NHL repeat domain-containing protein
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM4_32_b1_sep16_scaffold_336_19
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

19177..19380
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B7F1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82083.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM4_32_b1_sep16_scaffold_336_20
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19585..21141
DNA (1557bp) protein (519aa)
Fis family transcriptional regulator Tax=Laceyella sacchari RepID=UPI0003B41228
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:AEB07917.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
Displaying 23 items

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