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PLM4_32_b1_sep16_scaffold_647

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_647_1
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
DMT superfamily drug/metaboltie permease Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM74_IGNAJ
DMT superfamily drug/metaboltie permease
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM4_32_b1_sep16_scaffold_647_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

1542..2405
DNA (864bp) protein (288aa)
hypothetical protein
Tax=CG_Arma_01
PLM4_32_b1_sep16_scaffold_647_3
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2457..2798)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB05077.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Methylase involved in ubiquinone/menaquinone biosynthesis bin=GWF2_Lentisphaerae_50_93 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
type 11 methyltransferase
PLM4_32_b1_sep16_scaffold_647_4
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(3337..4233)
DNA (897bp) protein (299aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XYI5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO39803.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
diacylglycerol kinase catalytic subunit
PLM4_32_b1_sep16_scaffold_647_5
unknown

Not on your lists

4247..6148
DNA (1902bp) protein (634aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_647_6
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

6331..7557
DNA (1227bp) protein (409aa)
Glycosyl transferase Tax=Burkholderia sp. Ch1-1 RepID=I2IW93_9BURK
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM4_32_b1_sep16_scaffold_647_7
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

7569..8750
DNA (1182bp) protein (394aa)
Putative Lipopolysaccharide biosynthesis protein Tax=Candidatus Nitrospira defluvii RepID=D8PBP6_9BACT
putative lipopolysaccharide biosynthesis protein
Tax=RBG_16_Zixibacteria_48_11_curated
PLM4_32_b1_sep16_scaffold_647_8
unknown

Not on your lists

8747..9283
DNA (537bp) protein (179aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_647_9
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

9337..10068
DNA (732bp) protein (244aa)
polysaccharide polymerase Tax=Bacillus sp. FJAT-13831 RepID=UPI0002E0F8D0
Tax=GWB1_OD1_49_6_curated
PLM4_32_b1_sep16_scaffold_647_10
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

10216..11226
DNA (1011bp) protein (337aa)
Putative Serine protease do-like bin=GWA2_Ignavibacteria_55_11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
PDZ/DHR/GLGF domain-containing protein
Tax=RBG_16_Zixibacteria_50_21_curated
PLM4_32_b1_sep16_scaffold_647_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11294..12385)
DNA (1092bp) protein (364aa)
Glycosyl transferase group 1 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_647_12
Chlorobium phaeovibrioides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

12470..13516
DNA (1047bp) protein (349aa)
Glycosyl transferase, group 1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SCQ0_PROVI
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABP36259.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme; subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides; (strain DSM 265)).;"
PLM4_32_b1_sep16_scaffold_647_13
unknown

Not on your lists

13594..14274
DNA (681bp) protein (227aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_647_14
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(14271..15374)
DNA (1104bp) protein (368aa)
id=4230542 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
PLM4_32_b1_sep16_scaffold_647_15
candidate division Zixibacteria, Bacteria

Not on your lists

15543..17621
DNA (2079bp) protein (693aa)
Translation elongation factor G bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Translation elongation factor G {ECO:0000313|EMBL:EQB63251.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
fusA; Elongation factor G
PLM4_32_b1_sep16_scaffold_647_16
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

17636..18379
DNA (744bp) protein (248aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000373DD5A
hypothetical protein
Tax=Caldatribacterium californiense
PLM4_32_b1_sep16_scaffold_647_17
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18420..18908
DNA (489bp) protein (163aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. MCCC 1A10513.;"
Crossover junction endodeoxyribonuclease RuvC Tax=Glaciecola psychrophila 170 RepID=K6YSK3_9ALTE
ruvC; Holliday junction resolvase
PLM4_32_b1_sep16_scaffold_647_18
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18905..19495
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
Holliday junction DNA helicase RuvA Tax=Thioalkalivibrio RepID=UPI000369FB38
Holliday junction DNA helicase subunit RuvA
PLM4_32_b1_sep16_scaffold_647_19
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19507..20532
DNA (1026bp) protein (342aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Caldithrix abyssi DSM 13497 RepID=H1XP86_9BACT
Holliday junction DNA helicase RuvB
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM4_32_b1_sep16_scaffold_647_20
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20572..21612
DNA (1041bp) protein (347aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Nitrococcus mobilis Nb-231 RepID=A4BST9_9GAMM
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Tax=RBG_16_Gamma2_60_9_curated
PLM4_32_b1_sep16_scaffold_647_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21700..24393
DNA (2694bp) protein (898aa)
hypothetical protein; K07289 AsmA protein bin=bin3_NC10 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
AsmA family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_647_22
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

24443..25615
DNA (1173bp) protein (391aa)
tgt-2; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Tax=RIFOXYC12_FULL_TA06_54_24_curated
PLM4_32_b1_sep16_scaffold_647_23
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

25612..25944
DNA (333bp) protein (111aa)
hypothetical protein; K03210 preprotein translocase subunit YajC bin=BACIGN_2 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
yajC; preprotein translocase subunit YajC
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
PLM4_32_b1_sep16_scaffold_647_24
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26103..26621
DNA (519bp) protein (173aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
Peptide deformylase Tax=Cesiribacter andamanensis AMV16 RepID=M7NAH8_9BACT
Peptide deformylase
PLM4_32_b1_sep16_scaffold_647_25
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26631..27587
DNA (957bp) protein (319aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase bin=GWC2_Proteo_65_14_Ab886 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_647_26
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27550..27990
DNA (441bp) protein (147aa)
PASTA domain-containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
Displaying 26 items

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