ggKbase home page

PLM4_32_b1_sep16_scaffold_671

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_671_1
unknown

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(372..1511)
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NHS3_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB07504.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
RelA/SpoT domain-containing protein
PLM4_32_b1_sep16_scaffold_671_3
unknown

Not on your lists

comp(1514..2365)
DNA (852bp) protein (284aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_4
unknown

Not on your lists

comp(2543..2761)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3295..4608)
DNA (1314bp) protein (438aa)
Putative DNA helicase Tax=Thiomonas intermedia (strain K12) RepID=D5X4Y4_THIK1
DNA helicase
Putative DNA helicase {ECO:0000313|EMBL:ADG29808.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
PLM4_32_b1_sep16_scaffold_671_6
unknown

Not on your lists

comp(5097..5885)
DNA (789bp) protein (263aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_7
unknown

Not on your lists

comp(6118..6402)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_8
unknown

Not on your lists

comp(6461..6994)
DNA (534bp) protein (178aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_9
unknown

Not on your lists

comp(7004..7399)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7396..7740)
DNA (345bp) protein (115aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM4_32_b1_sep16_scaffold_671_trna_4
unknown

Not on your lists

comp(7824..7899)
DNA (76bp)
transferRNA Pseudo
PLM4_32_b1_sep16_scaffold_671_11
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8196..9422
DNA (1227bp) protein (409aa)
Putative signaling protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY95_ANATU
putative signaling protein
Tax=BJP_IG2158_Anaerolineales_38_74
PLM4_32_b1_sep16_scaffold_671_12
RLO_PLX_64_10, Bacteria

Not on your lists

9705..10340
DNA (636bp) protein (212aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_671_13
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10372..12270
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Integral membrane sensor signal transduction histidine kinase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJG5_DESK7
integral membrane sensor signal transduction histidine kinase
PLM4_32_b1_sep16_scaffold_671_14
RLO_PLX_64_10, Bacteria

Not on your lists

12267..13496
DNA (1230bp) protein (410aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_671_trna_3
unknown

Not on your lists

comp(13673..13746)
DNA (74bp)
transferRNA Arg
PLM4_32_b1_sep16_scaffold_671_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13767..14144)
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_671_trna_2
unknown

Not on your lists

comp(14220..14311)
DNA (92bp)
transferRNA Ser
PLM4_32_b1_sep16_scaffold_671_trna_1
unknown

Not on your lists

comp(14337..14421)
DNA (85bp)
transferRNA Ser
PLM4_32_b1_sep16_scaffold_671_16
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14701..15342
DNA (642bp) protein (214aa)
Two component transcriptional regulator, LuxR family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVM0_OPITP
two component LuxR family transcriptional regulator
Tax=RBG_16_Desulfobacca_58_9_curated
PLM4_32_b1_sep16_scaffold_671_17
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

15641..16537
DNA (897bp) protein (299aa)
Adenylate/guanylate cyclase with GAF sensor(S) Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FN32_DESAA
GAF sensor-containing adenylate/guanylate cyclase
Tax=RBG_16_Zixibacteria_43_9_curated
PLM4_32_b1_sep16_scaffold_671_18
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16724..17803
DNA (1080bp) protein (360aa)
Type IV pilus retraction protein PilT Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AEE7_CARHZ
pilT; type IV pilus retraction protein PilT
Type IV pilus retraction protein PilT {ECO:0000313|EMBL:ABB15108.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
PLM4_32_b1_sep16_scaffold_671_19
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

Not on your lists

comp(17811..18734)
DNA (924bp) protein (308aa)
hypothetical protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=MPI_Marinimicrobia_46_47
PLM4_32_b1_sep16_scaffold_671_20
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(18731..19873)
DNA (1143bp) protein (381aa)
mnmA; tRNA-specific 2-thiouridylase MnmA 2 (EC:2.8.1.-)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00036395B8
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_32_b1_sep16_scaffold_671_21
Anabaena sp. 90, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20034..20606)
DNA (573bp) protein (191aa)
TPR repeat domain-containing protein Tax=Anabaena sp. 90 RepID=K7WC06_9NOST
TPR repeat domain-containing protein {ECO:0000313|EMBL:AFW92913.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena sp. 90.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_671_22
unknown

Not on your lists

comp(20612..21844)
DNA (1233bp) protein (411aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_671_23
unknown

Not on your lists

comp(21841..23004)
DNA (1164bp) protein (388aa)

This feature has no annotations

Displaying 27 items

View Taxonomy