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PLM4_32_b1_sep16_scaffold_839

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_839_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
Magnesium transporter Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2C3_CALAS
mgtE; magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM4_32_b1_sep16_scaffold_839_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(376..1629)
DNA (1254bp) protein (418aa)
hypothetical protein; K03699 putative hemolysin bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM4_32_b1_sep16_scaffold_839_3
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1637..2107)
DNA (471bp) protein (157aa)
Endoribonuclease YbeY Tax=Moorella thermoacetica (strain ATCC 39073) RepID=YBEY_MOOTA
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
PLM4_32_b1_sep16_scaffold_839_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2082..4331)
DNA (2250bp) protein (750aa)
7TM receptor with intracellular metal dependent phosphohydrolase; K07037 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
7TM receptor with intracellular metal dependent phosphohydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_839_5
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4328..5311)
DNA (984bp) protein (328aa)
phosphate starvation protein PhoH Tax=Brevibacillus sp. phR RepID=UPI000316784D
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:EJL47205.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
PhoH family protein
PLM4_32_b1_sep16_scaffold_839_6
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(5434..6129)
DNA (696bp) protein (232aa)
Peptidoglycan-binding lysin domain-containing protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XNS9_9BACT
Peptidoglycan-binding lysin domain-containing protein {ECO:0000313|EMBL:EHO39869.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Peptidoglycan-binding lysin domain protein
PLM4_32_b1_sep16_scaffold_839_7
unknown

Not on your lists

comp(6133..6480)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_839_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(6599..8398)
DNA (1800bp) protein (600aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
aspartyl-tRNA synthetase
Tax=RIFOXYC12_FULL_TA06_54_24_curated
PLM4_32_b1_sep16_scaffold_839_9
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(8395..9672)
DNA (1278bp) protein (426aa)
hisS; histidyl-tRNA synthetase HisS (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia ATCC 43541.;"
Histidine--tRNA ligase Tax=Selenomonas noxia ATCC 43541 RepID=D4S4A2_9FIRM
PLM4_32_b1_sep16_scaffold_839_10
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

comp(9669..10070)
DNA (402bp) protein (134aa)
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
PLM4_32_b1_sep16_scaffold_839_11
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(10088..10576)
DNA (489bp) protein (163aa)
Sugar hosphotransferase system IIA component Tax=Halogranum salarium B-1 RepID=J2Z8X6_9EURY
PTS system fructose subfamily transporter subunit IIA
Tax=RBG_16_Caldithrix_48_16_curated
PLM4_32_b1_sep16_scaffold_839_12
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10634..11572)
DNA (939bp) protein (313aa)
YbbR family protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCP8_DESAR
hypothetical protein
YbbR family protein {ECO:0000313|EMBL:AEB09329.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
PLM4_32_b1_sep16_scaffold_839_13
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11597..12967)
DNA (1371bp) protein (457aa)
Cell wall hydrolase/autolysin Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBP5_THICA
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEG31281.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
PLM4_32_b1_sep16_scaffold_839_14
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12967..13863)
DNA (897bp) protein (299aa)
Peptidase M23 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMH6_DESB2
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADK86219.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
PLM4_32_b1_sep16_scaffold_839_15
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(14026..14928)
DNA (903bp) protein (301aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Zixibacteria_53_22_curated
PLM4_32_b1_sep16_scaffold_839_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14978..16426)
DNA (1449bp) protein (483aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
protease Do (EC:3.4.21.108)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_839_17
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

16822..17550
DNA (729bp) protein (243aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
lpxH; metallophosphoesterase (EC:3.6.1.-)
Tax=RIFOXYC12_FULL_TA06_54_24_curated
Displaying 17 items

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