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PLM4_32_b1_sep16_scaffold_978

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_978_1
unknown

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3..98
DNA (96bp) protein (32aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_978_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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140..553
DNA (414bp) protein (138aa)
hypothetical protein Tax=Rhizobium leguminosarum RepID=UPI00036521EE
Uncharacterized protein {ECO:0000313|EMBL:EJJ28414.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
transmembrane protein
PLM4_32_b1_sep16_scaffold_978_3
unknown

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555..1247
DNA (693bp) protein (231aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_978_4
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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1244..2644
DNA (1401bp) protein (467aa)
Amidophosphoribosyltransferase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L7S2_9BACT
amidophosphoribosyltransferase
Tax=RBG_16_Zixibacteria_43_9_curated
PLM4_32_b1_sep16_scaffold_978_5
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2734..3435
DNA (702bp) protein (234aa)
radical SAM protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI00037D3E3F
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
PLM4_32_b1_sep16_scaffold_978_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3432..5021
DNA (1590bp) protein (530aa)
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_978_7
unknown

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5051..5974
DNA (924bp) protein (308aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_978_8
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6017..6214)
DNA (198bp) protein (66aa)
Periplasmic protease Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0APA8_IGNAJ
periplasmic protease
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM4_32_b1_sep16_scaffold_978_9
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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comp(6225..7400)
DNA (1176bp) protein (392aa)
HNH endonuclease bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HNH nuclease
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM4_32_b1_sep16_scaffold_978_10
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7564..10860)
DNA (3297bp) protein (1099aa)
Peptidase S41 Tax=sediment metagenome RepID=D9PGC5_9ZZZZ
periplasmic protease
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_32_b1_sep16_scaffold_978_11
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11055..11777
DNA (723bp) protein (241aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003625668
DNA-3-methyladenine glycosylase
PLM4_32_b1_sep16_scaffold_978_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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12424..12735
DNA (312bp) protein (104aa)
50S ribosomal protein L21 Tax=Rhodanobacter fulvus Jip2 PF0_9GAMM">RepID=I4VPF0_9GAMM
rplU; 50S ribosomal subunit protein L21
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_978_13
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


12747..13004
DNA (258bp) protein (86aa)
50S ribosomal protein L27 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SGC8_9CYAN
50S ribosomal protein L25
Tax=S_Thermoanaerobacterales_50_218
PLM4_32_b1_sep16_scaffold_978_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

13165..13779
DNA (615bp) protein (205aa)
3-deoxy-manno-octulosonate cytidylyltransferase bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_32_b1_sep16_scaffold_978_15
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13841..15472
DNA (1632bp) protein (544aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00089783}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00089804};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
CTP synthase (EC:6.3.4.2)
CTP synthase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0N5_THEOJ
PLM4_32_b1_sep16_scaffold_978_16
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

15492..16337
DNA (846bp) protein (282aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO-8-phosphate synthetase, KDOPS) (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ01_9BACT
Tax=CG_Arma_02
PLM4_32_b1_sep16_scaffold_978_17
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16369..18750
DNA (2382bp) protein (794aa)
arylsulfatase Tax=Verrucomicrobium spinosum RepID=UPI00017443C5
sulfatase
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_32_b1_sep16_scaffold_978_18
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18779..19123
DNA (345bp) protein (115aa)
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein {ECO:0000313|EMBL:ACU91288.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ACU91288.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
KpsF/GutQ family protein Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LXQ2_DESBD
Displaying 18 items

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