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PLM4_32_b1_sep16_scaffold_3417

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3417_1
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(97..852)
DNA (756bp) protein (252aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Type III pantothenate kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XIV5_9BACT
pantothenate kinase
PLM4_32_b1_sep16_scaffold_3417_2
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(852..1655)
DNA (804bp) protein (268aa)
Biotin--acetyl-CoA-carboxylase ligase Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXI4_DESAC
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
biotin-(acetyl-CoA-carboxylase) ligase BirA
PLM4_32_b1_sep16_scaffold_3417_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1658..2527)
DNA (870bp) protein (290aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVH7_OPITP
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KFC73391.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PLM4_32_b1_sep16_scaffold_3417_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2524..4569)
DNA (2046bp) protein (682aa)
UvrABC system protein B Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
uvrB; UvrABC system protein B
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_3417_5
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(4566..4967)
DNA (402bp) protein (134aa)
Transcriptional regulator Tax=uncultured bacterium RepID=K2DB16_9BACT
hypothetical protein
Tax=BJP_IG2069_Spirochaetales_48_31
PLM4_32_b1_sep16_scaffold_3417_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5059..6282)
DNA (1224bp) protein (408aa)
Valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_32_b1_sep16_scaffold_3417_7
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6533..7828
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Proteobacteria bacterium CAG:139 RepID=R6AVK5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDN46068.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
PLM4_32_b1_sep16_scaffold_3417_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7875..8795)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6C8_SALRD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_3417_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8874..10430
DNA (1557bp) protein (519aa)
Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
glucose/sorbosone dehydrogenase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Displaying 9 items

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