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PLM4_32_b1_sep16_scaffold_791_31

Organism: PLM4_32_b1_sep16_Eisenbacteria_66_8

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 12 / 38
Location: 36434..37180

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ Tax=Holophaga foetida DSM 6591 RepID=H1P0D9_9BACT bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 266.0
  • Bit_score: 255
  • Evalue 3.20e-65
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 267.0
  • Bit_score: 166
  • Evalue 7.20e-39
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 266.0
  • Bit_score: 255
  • Evalue 4.50e-65

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 747
GTGATCGCCGAAGTGCCGGCGCGCATCGACAAGATCGTGGCGATGATTCACGAGATGGACCAGCGCCTGCGCCAGGTCGAAATCGTGGCGAAAATGGTCGACGTCGACCACGAGGCCACGCGCGAGCTGGGCGTGAACTGGGAAGCTCTCAACCTCAAGGCCGGTCAATTCGCCGGCGACATCGTCACGGGACAGGCGCTCGCCGATCCGTTCGGCCAGCTCCGCATGGGTACCGTGCAGTCGTGGGGCGAGCTCAATCTGATCATCGAAGCGCTGGAGAAGGACAACAAGGCCAACATCGTGTCCAATCCGAAGATCAGCACCGCCGACAATCAGGAGGCGCGGATCATGGTCGGCAAGGAGATCCCCCTGATCGTAAGCGACGAGGCGGGGAATCCGATAACCGAGCTCAAGAAGATCGGCGTCATCCTGCGGGTCACCCCGCACGTCAACTCGGATGGCACCATCACCATGGACCTCCATCCGGAGCTGTCGGACCTTTCGCAGCAAGCGACGGTACAGGGCGGCGTCATCGTCAATCTGCAGGAAGCGGACACCCGCGTCGTCGTCAAGGACGGCGAAACGGCGGTCATCGGCGGATTGATCAGCGACAGCCAGAGCTCGCTGCGCACCGGCGTGCCGGTCCTCAAGGACATGCCGCTGCTCGGCGCCTTGTTCCGGTACGAGACCAAGACGACCCGGAAGCGGGAGCTCATCATCTTCGTGACACCGAAAGTGGTGGGATAG
PROTEIN sequence
Length: 249
VIAEVPARIDKIVAMIHEMDQRLRQVEIVAKMVDVDHEATRELGVNWEALNLKAGQFAGDIVTGQALADPFGQLRMGTVQSWGELNLIIEALEKDNKANIVSNPKISTADNQEARIMVGKEIPLIVSDEAGNPITELKKIGVILRVTPHVNSDGTITMDLHPELSDLSQQATVQGGVIVNLQEADTRVVVKDGETAVIGGLISDSQSSLRTGVPVLKDMPLLGALFRYETKTTRKRELIIFVTPKVVG*