ggKbase home page

PLM4_32_b1_sep16_scaffold_8888

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_8888_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_8888_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

73..1374
DNA (1302bp) protein (434aa)
Processing peptidase bin=GWC2_Methylomirabilis_70_16 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Zn-dependent peptidase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8888_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1380..2075
DNA (696bp) protein (232aa)
Putative peptidase, S54 (Rhomboid) family bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase, S54 (Rhomboid) family
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8888_4
unknown

Not on your lists

2155..2271
DNA (117bp) protein (39aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_8888_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2268..3185
DNA (918bp) protein (306aa)
rRNA methyltransferase, YqxC-related, putative bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rRNA methylase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8888_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3182..3484
DNA (303bp) protein (101aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_8888_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3481..3885
DNA (405bp) protein (135aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_8888_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3921..5648
DNA (1728bp) protein (576aa)
DNA repair protein RecN bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA repair protein RecN
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_8888_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5658..7247
DNA (1590bp) protein (530aa)
Protein translocase subunit SecA bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
secA; preprotein translocase subunit SecA
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

View Taxonomy