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PLM4_32_b1_sep16_scaffold_16924

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_16924_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2..595
DNA (594bp) protein (198aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_16924_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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592..1566
DNA (975bp) protein (325aa)
Putative ABC transporter permiase component bin=GWF2_Methylomirabilis_70_14 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter permiase component
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_16924_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1563..2285
DNA (723bp) protein (241aa)
LivG-like protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LivG-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_16924_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2448..3017
DNA (570bp) protein (190aa)
Probable high-affinity branched-chain amino acid transport ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braG; high-affinity branched-chain amino acid transport ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_16924_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3037..3483)
DNA (447bp) protein (149aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_16924_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3609..4070)
DNA (462bp) protein (154aa)
GAF sensor hybrid histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor hybrid histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_16924_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4238..4879)
DNA (642bp) protein (214aa)
Endonuclease/exonuclease/phosphatase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_16924_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5051..7285
DNA (2235bp) protein (745aa)
Isovaleryl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase, N-terminal domain protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_16924_9
unknown

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comp(7476..7574)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_16924_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7689..8852
DNA (1164bp) protein (388aa)
L-carnitine dehydratase/bile acid-inducible protein F bin=GWC2_Methylomirabilis_70_16 species=Streptomyces sp. AA4 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CAIB/BAIF family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_16924_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8867..9241
DNA (375bp) protein (125aa)
ATP-dependent Clp protease adaptor protein ClpS bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATP-dependent Clp protease adaptor protein ClpS
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_16924_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(9265..11265)
DNA (2001bp) protein (667aa)
Putative dehydratase, YjhG/YagF family Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMC5_SINAD
dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 12 items

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