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PLM4_32_b1_sep16_scaffold_1085

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1085_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..863)
DNA (861bp) protein (287aa)
Family 3 adenylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor-containing diguanylate cyclase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1085_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(874..2454)
DNA (1581bp) protein (527aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1085_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2514..2972
DNA (459bp) protein (153aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1085_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3039..3944)
DNA (906bp) protein (302aa)
Cyclopropane-fatty-acyl-phospholipid synthase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cfa2; cyclopropane-fatty-acyl-phospholipid synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1085_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3941..5065)
DNA (1125bp) protein (375aa)
geranylgeranyl reductase (EC:1.-.-.-)
Geranylgeranyl reductase bin=GWC2_Methylomirabilis_70_24 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1085_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5065..5412)
DNA (348bp) protein (116aa)
Methyltransferase, cyclopropane fatty acid synthase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cyclopropane-fatty-acyl-phospholipid synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1085_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(5412..6131)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein bin=bin7_NC10_sister species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein I
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_1085_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6136..6888)
DNA (753bp) protein (251aa)
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
livG-3; branched-chain amino acid ABC transporter ATP-binding protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_1085_9
R_NC10_66_22, NC10, Bacteria

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comp(6891..7874)
DNA (984bp) protein (328aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_32_b1_sep16_scaffold_1085_10
R_NC10_66_22, NC10, Bacteria

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comp(7885..8766)
DNA (882bp) protein (294aa)
livH-3; branched-chain amino acid ABC transporter permease bin=bin7_NC10_sister species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_32_b1_sep16_scaffold_1085_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(8788..10995)
DNA (2208bp) protein (736aa)
Putative uncharacterized protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_1085_12
unknown

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comp(11103..11222)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 12 items

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