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PLM4_32_b1_sep16_scaffold_1274

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1274_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..1154)
DNA (1152bp) protein (384aa)
pilR; regulator protein pilR; K02667 two-component system, NtrC family, response regulator PilR bin=bin7_NC10_sister species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pilR; transcriptional regulatory protein pilR
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1274_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1234..1704)
DNA (471bp) protein (157aa)
Putative Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1650..2849)
DNA (1200bp) protein (400aa)
putative sensor protein PilS (EC:2.7.13.3)
Putative Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2865..4064)
DNA (1200bp) protein (400aa)
Type 4 fimbrial assembly protein pilC bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pilus assembly protein PilC
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4086..5219)
DNA (1134bp) protein (378aa)
Twitching motility pilus retraction ATPase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pilT-4; twitching motility pilus retraction protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1274_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5494..6030)
DNA (537bp) protein (179aa)
Predicted phosphatase bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphatase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6027..6842)
DNA (816bp) protein (272aa)
Protein mazG bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein mazG
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7457..7894
DNA (438bp) protein (146aa)
Heat shock protein Hsp20 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molecular chaperone
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_1274_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7997..9913
DNA (1917bp) protein (639aa)
Chaperone protein DnaK bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9983..10990
DNA (1008bp) protein (336aa)
Chaperone protein DnaJ bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
chaperone protein DnaJ
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1274_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10987..11373
DNA (387bp) protein (129aa)
Transcriptional regulator (MerR family) protein bin=GWF2_Methylomirabilis_70_14 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MerR family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1274_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11393..11986
DNA (594bp) protein (198aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
Lon protease bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 12 items

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