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PLM4_32_b1_sep16_scaffold_1483

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1483_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..258
DNA (258bp) protein (86aa)
Hydrolase, NUDIX family bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NUDIX hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1483_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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264..1769
DNA (1506bp) protein (502aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase bin=GWC2_Methylomirabilis_70_16 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1483_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1777..2622
DNA (846bp) protein (282aa)
PHP domain protein bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PHP domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1483_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2711..3055
DNA (345bp) protein (115aa)
hypothetical protein CJLT1_11578 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_1483_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3165..4532
DNA (1368bp) protein (456aa)
Putative RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma-24 factor
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_1483_6

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5360..6997
DNA (1638bp) protein (546aa)
ATP synthase beta chain, putative Tax=Eimeria mitis RepID=U6K7D4_9EIME
Uncharacterized protein {ECO:0000313|EMBL:KKL66431.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA-directed RNA polymerase subunit sigma
PLM4_32_b1_sep16_scaffold_1483_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7007..7918)
DNA (912bp) protein (304aa)
id=4830687 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1483_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8015..9181
DNA (1167bp) protein (389aa)
Putative transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1483_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9260..9793
DNA (534bp) protein (178aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1483_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9798..10775
DNA (978bp) protein (326aa)
proteasome-activating nucleotidase (EC:3.6.4.3)
Proteasome-activating nucleotidase bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1483_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10808..11551
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEQ0_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_32_b1_sep16_scaffold_1483_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11586..12008
DNA (423bp) protein (141aa)
putative thioesterase (EC:3.1.2.28)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1483_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11974..13650
DNA (1677bp) protein (559aa)
formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1483_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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13699..14463
DNA (765bp) protein (255aa)
ABC transporter related bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 14 items

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