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PLM4_32_b1_sep16_scaffold_1594

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1594_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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31..600
DNA (570bp) protein (190aa)
Possible acetyl-CoA synthetase bin=GWC2_Methylomirabilis_70_16 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA synthetase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1594_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(551..1198)
DNA (648bp) protein (216aa)
SNARE associated Golgi protein-like protein bin=GWA2_Elusi_like_61_42 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_b1_sep16_scaffold_1594_3
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1369..1689
DNA (321bp) protein (107aa)
hypothetical protein Tax=Paenibacillus sp. HW567 RepID=UPI000373ED28
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67630.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
siroheme synthase
PLM4_32_b1_sep16_scaffold_1594_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1719..2702)
DNA (984bp) protein (328aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D6503
peptide ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_1594_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2699..3706)
DNA (1008bp) protein (336aa)
Oligopeptide ABC transporter ATP-binding protein bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Oligopeptide/dipeptide ABC transporter, ATPase subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_1594_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3703..4596)
DNA (894bp) protein (298aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2951; ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_1594_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4593..5513)
DNA (921bp) protein (307aa)
ABC transporter permease bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_1594_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5515..7074)
DNA (1560bp) protein (520aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_1594_9
unknown

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7107..7250
DNA (144bp) protein (48aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1594_10
unknown

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comp(7317..7649)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1594_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7658..9058)
DNA (1401bp) protein (467aa)
response regulator in two-component regulatory system, sigma 54-dependent bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator in two-component regulatory system, sigma 54-dependent
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_1594_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9428..10408
DNA (981bp) protein (327aa)
D-3-phosphoglycerate dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-3-phosphoglycerate dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_1594_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10446..11234
DNA (789bp) protein (263aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_1594_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11248..11994
DNA (747bp) protein (249aa)
TIGR00370 family protein bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative regulatory protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_1594_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11991..12920
DNA (930bp) protein (310aa)
Allophanate hydrolase subunit 2 bin=GWF2_Methylomirabilis_70_14 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Dur1; allophanate hydrolase subunit 2
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_1594_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12946..13089
DNA (144bp) protein (48aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase bin=GWF2_Methylomirabilis_70_14 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 16 items

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