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PLM4_32_b1_sep16_scaffold_1627

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1627_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..759)
DNA (759bp) protein (253aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pdhC; dihydrolipoamide S-acetyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(756..1736)
DNA (981bp) protein (327aa)
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1741..2739)
DNA (999bp) protein (333aa)
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component, alpha subunit bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2756..3034)
DNA (279bp) protein (93aa)
NADH-quinone oxidoreductase subunit K bin=GWC2_Methylomirabilis_70_24 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NADH-ubiquinone oxidoreductase subunit 4L
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3036..3527)
DNA (492bp) protein (164aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3524..4120)
DNA (597bp) protein (199aa)
4Fe-4S ferredoxin; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
4Fe-4S ferredoxin
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4124..5236)
DNA (1113bp) protein (371aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5)
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5233..6831)
DNA (1599bp) protein (533aa)
NADH dehydrogenase I, G subunit (75 kDa) bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Molybdopterin oxidoreductase Fe4S4 region
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6840..8090)
DNA (1251bp) protein (417aa)
NADH dehydrogenase I subunit F bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NADH dehydrogenase I, F subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8090..8575)
DNA (486bp) protein (162aa)
NADH dehydrogenase I subunit E bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NADH-quinone oxidoreductase subunit E
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8699..10069)
DNA (1371bp) protein (457aa)
NADH-quinone oxidoreductase subunit D bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH dehydrogenase I subunit D
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10126..10623)
DNA (498bp) protein (166aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1627_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10643..11101)
DNA (459bp) protein (153aa)
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase subunit B (EC:1.6.99.5)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_1627_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11092..11451)
DNA (360bp) protein (120aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit A bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 14 items

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