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PLM4_32_b1_sep16_scaffold_1764

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1764_1
unknown

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3..170
DNA (168bp) protein (56aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1764_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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167..532
DNA (366bp) protein (122aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHY4_ANADF
two component sigma54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS28330.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_32_b1_sep16_scaffold_1764_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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588..1466
DNA (879bp) protein (293aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livM; branched chain amino acid ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1764_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1466..2305
DNA (840bp) protein (280aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_24 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1764_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2302..3489
DNA (1188bp) protein (396aa)
Putative branched chain amino acid ABC transporter substrate-binding protein bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_1764_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3486..4265
DNA (780bp) protein (260aa)
ABC transporter related bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braF; High-affinity branched-chain amino acid transport ATP-binding protein braF
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_1764_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4276..5007
DNA (732bp) protein (244aa)
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_1764_8
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5034..5924
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold protein Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V252_MYCFO
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase {ECO:0000313|EMBL:CDO20242.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
alpha/beta hydrolase
PLM4_32_b1_sep16_scaffold_1764_9
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6018..6566)
DNA (549bp) protein (183aa)
Biphenyl 2,3-dioxygenase beta subunit Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WTH1_9NOCA
Biphenyl 2,3-dioxygenase beta subunit {ECO:0000313|EMBL:EOM78548.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
aromatic-ring-hydroxylating dioxygenase subunit beta
PLM4_32_b1_sep16_scaffold_1764_10
uncultured actinobacterium, Actinobacteria, Actinobacteria, Bacteria

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comp(6580..7917)
DNA (1338bp) protein (446aa)
Aromatic oxygenase (Fragment) Tax=uncultured actinobacterium RepID=T1WVV6_9ACTN
Aromatic oxygenase {ECO:0000313|EMBL:AGU43512.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; environmental samples.;" source="uncultured actinobacterium.;"
aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein
PLM4_32_b1_sep16_scaffold_1764_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8010..10307
DNA (2298bp) protein (766aa)
xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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