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PLM4_32_b1_sep16_scaffold_1976

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1976_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..363
DNA (363bp) protein (121aa)
Histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1976_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(378..1280)
DNA (903bp) protein (301aa)
Transcription termination factor Rho bin=GWF2_Methylomirabilis_70_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcription termination factor Rho
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1976_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1668..2813
DNA (1146bp) protein (382aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXH8_RUBXD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_32_b1_sep16_scaffold_1976_4
unknown

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comp(2872..2991)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1976_5
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3009..4496)
DNA (1488bp) protein (496aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001745B1D
Uncharacterized protein {ECO:0000313|EMBL:ESS71789.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1976_6
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4493..5164)
DNA (672bp) protein (224aa)
Isochorismatase {ECO:0000313|EMBL:ESS71788.1}; EC=3.3.2.1 {ECO:0000313|EMBL:ESS71788.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein Tax=Methylovulum miyakonense RepID=UPI000377BDB2
isochorismatase hydrolase
PLM4_32_b1_sep16_scaffold_1976_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5315..6382)
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TRC8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP64847.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter ATPase
PLM4_32_b1_sep16_scaffold_1976_8
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6448..7365
DNA (918bp) protein (306aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002EA178C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_32_b1_sep16_scaffold_1976_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7379..9742
DNA (2364bp) protein (788aa)
Chemotaxis protein methyltransferase CheR Tax=Cystobacter fuscus DSM 2262 RepID=S9P6R3_9DELT
hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_1976_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11100..12017
DNA (918bp) protein (306aa)
Uroporphyrinogen decarboxylase (URO-D) bin=GWF2_Methylomirabilis_70_14 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1976_11
unknown

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12122..12340
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1976_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12351..13097)
DNA (747bp) protein (249aa)
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
beta-lactamase domain protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_1976_13
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

13165..13881
DNA (717bp) protein (239aa)
UvrABC system protein C bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Alishewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
Displaying 13 items

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