ggKbase home page

PLM4_32_b1_sep16_scaffold_15565

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_15565_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..263)
DNA (261bp) protein (87aa)
Nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase bin=GWC2_Methylomirabilis_70_16 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_15565_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(276..1154)
DNA (879bp) protein (293aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
succinyl-CoA synthetase, alpha subunit
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_15565_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1151..2320)
DNA (1170bp) protein (390aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_15565_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2325..2867)
DNA (543bp) protein (181aa)
Succinate dehydrogenase subunit B (EC:1.3.5.1) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Succinate dehydrogenase subunit B (EC:1.3.5.1)
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_15565_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2858..3127)
DNA (270bp) protein (90aa)
Succinate dehydrogenase subunit B bin=GWC2_Methylomirabilis_70_16 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
succinate dehydrogenase and fumarate reductase iron-sulfur protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_15565_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3127..4929)
DNA (1803bp) protein (601aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_15565_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4929..6242)
DNA (1314bp) protein (438aa)
integral membrane protein bin=bin3_NC10 species=Streptomyces sp. BoleA5 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
integral membrane protein
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_15565_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6340..7182)
DNA (843bp) protein (281aa)
fumarate hydratase (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_15565_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7230..7520)
DNA (291bp) protein (97aa)
Malate dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
malate dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

View Taxonomy