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PLM4_32_b1_sep16_scaffold_4269

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4269_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..612
DNA (612bp) protein (204aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_4269_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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715..1365
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TetR family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4269_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1368..2009
DNA (642bp) protein (214aa)
ECF subfamily RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sigW5; ECF subfamily RNA polymerase sigma factor
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4269_4
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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2152..2463
DNA (312bp) protein (104aa)
50S ribosomal protein L21 bin=GWA2_Elusimicrobia_69_24 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
50S ribosomal protein L21
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_32_b1_sep16_scaffold_4269_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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2468..2728
DNA (261bp) protein (87aa)
50S ribosomal protein L27 bin=GWA2_Elusimicrobia_69_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
50S ribosomal protein L27
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_32_b1_sep16_scaffold_4269_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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2762..3781
DNA (1020bp) protein (340aa)
GTPase obg bin=GWA2_Elusimicrobia_69_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
GTPase obg
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_32_b1_sep16_scaffold_4269_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3760..4884
DNA (1125bp) protein (375aa)
Glutamate 5-kinase bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
gamma-glutamyl kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4269_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4929..5732
DNA (804bp) protein (268aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4269_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5696..6094
DNA (399bp) protein (133aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4269_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6162..6746
DNA (585bp) protein (195aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4269_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6746..7114
DNA (369bp) protein (123aa)
Iojap-related protein bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Iojap-related protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4269_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7184..7549
DNA (366bp) protein (122aa)
Transcriptional regulators, TraR/DksA family bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulators, TraR/DksA family
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4269_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

7632..8678
DNA (1047bp) protein (349aa)
Tetratricopeptide TPR_2 bin=GWA2_Elusimicrobia_69_24 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying 13 items

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