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PLM4_32_b1_sep16_scaffold_4533

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4533_1
unknown

Not on your lists

comp(7..150)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4533_2
unknown

Not on your lists

245..493
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4533_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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505..945
DNA (441bp) protein (147aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4533_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

942..1589
DNA (648bp) protein (216aa)
Uncharacterized protein conserved in bacteria bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4533_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(2021..2920)
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5N6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH80297.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Hypothetical protein
PLM4_32_b1_sep16_scaffold_4533_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2917..3579)
DNA (663bp) protein (221aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_4533_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3576..4400)
DNA (825bp) protein (275aa)
Putative phenylacetic acid degradation protein bin=GWF2_Methylomirabilis_70_14 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative phenylacetic acid degradation protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_4533_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4403..5713)
DNA (1311bp) protein (437aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
paaK; phenylacetate--CoA ligase
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_4533_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5750..6019)
DNA (270bp) protein (90aa)
id=4891638 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4533_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6019..6222)
DNA (204bp) protein (68aa)
Glycosyl transferase group 1 bin=GWC2_Methylomirabilis_70_24 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4533_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7156..7689)
DNA (534bp) protein (178aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_4533_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7700..8923)
DNA (1224bp) protein (408aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB bin=GWC2_Methylomirabilis_70_24 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
(dimethylallyl)adenosine tRNA methylthiotransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4533_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9018..9971)
DNA (954bp) protein (318aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] bin=bin7_NC10_sister species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase subunit alpha
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_4533_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9955..13455)
DNA (3501bp) protein (1167aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4533_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13481..13957)
DNA (477bp) protein (159aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4533_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13980..14423)
DNA (444bp) protein (148aa)
GMP synthase [glutamine-hydrolyzing] bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
guaA; GMP synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4533_17
unknown

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14450..14683
DNA (234bp) protein (78aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4533_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14951..15844)
DNA (894bp) protein (298aa)
IMP dehydrogenase family protein bin=GWF2_Methylomirabilis_70_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
guaB; IMP dehydrogenase/GMP reductase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 18 items

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