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PLM4_32_b1_sep16_scaffold_4772

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4772_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..732)
DNA (732bp) protein (244aa)
Branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like)
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4772_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(788..1729)
DNA (942bp) protein (314aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1726..2532)
DNA (807bp) protein (269aa)
Branched-chain amino acid ABC-type transport system, permease components bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4772_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2605..3885)
DNA (1281bp) protein (427aa)
ABC-type branched-chain amino acid transport systems bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type branched-chain amino acid transport systems, periplasmic component
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4772_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3911..5062)
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase, short-chain specific bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5081..5374)
DNA (294bp) protein (98aa)
3-hydroxybutyryl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-hydroxyacyl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5371..5787)
DNA (417bp) protein (139aa)
3-hydroxybutyryl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-hydroxybutyryl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5869..6216)
DNA (348bp) protein (116aa)
id=3970989 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6259..6795)
DNA (537bp) protein (179aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6797..7552)
DNA (756bp) protein (252aa)
Putative hydrolase (HAD superfamily) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAD family hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7549..8229)
DNA (681bp) protein (227aa)
3-hydroxypropionyl-coenzyme A dehydratase bin=GWC2_Methylomirabilis_70_24 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
enoyl-CoA hydratase/isomerase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4772_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8773..8874)
DNA (102bp) protein (34aa)
id=4915453 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8871..9878)
DNA (1008bp) protein (336aa)
ABC-type spermidine/putrescine transport system, ATPase component bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_4772_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9875..10450)
DNA (576bp) protein (192aa)
Major facilitator superfamily transporter bin=GWC2_Methylomirabilis_70_16 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 14 items

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