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PLM4_32_b1_sep16_scaffold_2009

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2009_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..573
DNA (573bp) protein (191aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2009_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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561..1952
DNA (1392bp) protein (464aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2009_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1952..3034
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2009_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3046..4488
DNA (1443bp) protein (481aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2009_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4488..5615
DNA (1128bp) protein (376aa)
Stage V sporulation protein E bin=GWC2_Methylomirabilis_70_16 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
stage V sporulation protein E
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2009_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5615..7015
DNA (1401bp) protein (467aa)
UDP-N-acetylmuramate--L-alanine ligase bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
murC; UDP-N-acetylmuramate--L-alanine ligase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2009_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7018..7902
DNA (885bp) protein (295aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2009_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8199..8987
DNA (789bp) protein (263aa)
Cell division protein FtsQ bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
polypeptide-transport-associated domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2009_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8996..10243
DNA (1248bp) protein (416aa)
Cell division protein ftsA bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cell division protein FtsA
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2009_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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10353..11504
DNA (1152bp) protein (384aa)
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cell division protein FtsZ
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_2009_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11703..12467
DNA (765bp) protein (255aa)
Multi-copper polyphenol oxidoreductase, laccase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2009_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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12461..13069
DNA (609bp) protein (203aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alanine racemase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 12 items

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