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PLM4_32_b1_sep16_scaffold_2213

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2213_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..125)
DNA (123bp) protein (41aa)
Radical SAM superfamily bin=GWC2_Methylomirabilis_70_16 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Radical SAM superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2213_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(174..761)
DNA (588bp) protein (196aa)
SNARE associated Golgi protein-like protein bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
membrane-associated protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2213_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(761..2569)
DNA (1809bp) protein (603aa)
Glycosyl transferase family 39 bin=GWC2_Methylomirabilis_70_16 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyl transferase 39
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2213_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2569..2967)
DNA (399bp) protein (133aa)
id=3609760 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2213_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2964..3656)
DNA (693bp) protein (231aa)
lolD; lipoprotein efflux ABC transporter ATPase, LolD (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component bin=GWC2_Methylomirabilis_70_24 species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2213_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3673..4863)
DNA (1191bp) protein (397aa)
Putative ABC transporter permease protein bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2213_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4877..7225)
DNA (2349bp) protein (783aa)
Flavin-dependent dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2213_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7222..7809)
DNA (588bp) protein (196aa)
Beta-ketoacyl synthase bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-[acyl-carrier-protein] synthase 2 (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II)
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 8 items

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