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PLM4_32_b1_sep16_scaffold_2770

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2770_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..1343)
DNA (1341bp) protein (447aa)
Xanthine/uracil/vitamin C permease bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
xanthine/uracil/vitamin C permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2770_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1347..2177)
DNA (831bp) protein (277aa)
tRNA (Adenine-N(1)-)-methyltransferase bin=GWF2_Methylomirabilis_70_14 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (adenine-N(1)-)-methyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2770_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2164..3399)
DNA (1236bp) protein (412aa)
Fosmidomycin resistance protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar phosphate permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2770_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3526..4698)
DNA (1173bp) protein (391aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin3_NC10 organism_group=NC10
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_32_b1_sep16_scaffold_2770_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4723..6126)
DNA (1404bp) protein (468aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2770_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6141..6911)
DNA (771bp) protein (257aa)
PDZ/DHR/GLGF domain-containing protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
PDZ/DHR/GLGF domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_32_b1_sep16_scaffold_2770_7
unknown

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comp(6905..7117)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2770_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7123..8121)
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dTDP-glucose 4,6-dehydratase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2770_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8167..8721)
DNA (555bp) protein (185aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase bin=GWC2_Methylomirabilis_70_16 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2770_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8721..9782)
DNA (1062bp) protein (354aa)
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase (DTDP-glucose synthase) (DTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2770_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9912..10832
DNA (921bp) protein (307aa)
Molybdopterin biosynthesis protein MoeB bin=GWF2_Methylomirabilis_70_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moeB1; molybdopterin biosynthesis protein MoeB
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2770_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10902..11141
DNA (240bp) protein (80aa)
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase bin=bin7_NC10_sister species=Nocardiopsis chromatogenes genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
UBA/THIF-type NAD/FAD binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2770_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11506..12309)
DNA (804bp) protein (268aa)
hypothetical protein bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_2770_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12353..12532)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AS57_AZOBR
conserved hypothetical protein; putative signal peptide
Uncharacterized protein {ECO:0000313|EMBL:CCD00268.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_32_b1_sep16_scaffold_2770_15
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13177..13671)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DAH8_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT73934.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_2770_16
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13718..14119)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Burkholderia terrae BS001 RepID=I5D3A0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIN02619.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_2770_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(14353..15726)
DNA (1374bp) protein (458aa)
Transposase IS4 family protein (Fragment) Tax=mine drainage metagenome RepID=T0XVJ4_9ZZZZ
transposase, IS4 family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_2770_18
unknown

Not on your lists

15853..16344
DNA (492bp) protein (164aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2770_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16366..16494
DNA (129bp) protein (43aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 19 items

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